RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ATF6BQ99941 703 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 WACQ9BTA9 647 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 TVP23BQ9NYZ1 205 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 SF3B6Q9Y3B4 125 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 AGAP14A8MT82 685 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 GFYI3L273 518 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 FFAR1O14842 300 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 STOMP27105 288 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 SLC6A1P30531 599 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 HNF1BP35680 557 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 RPL3P39023 403 aaKnown RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 CAV3P56539 151 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 CDH18Q13634 790 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 C17orf99Q6UX52 265 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 BCDIN3DQ7Z5W3 292 aaKnown RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 COMMD7Q86VX2 200 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 GPALPP1Q8IXQ4 340 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 TIGD4Q8IY51 512 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMG6-207ENST00000570756 CLP1Q92989 425 aaKnown RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 OTULINQ96BN8 352 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 TM9SF2Q99805 663 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 WRAP53Q9BUR4 548 aaKnown RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 CLEC4MQ9H2X3 399 aaPredicted RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 TMEM161AQ9NX61 479 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 TRDV1A0A1B0GX56 115 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 TMEM189-UBE2V1I3L0A0 370 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 IGFBP1P08833 259 aaPredicted RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 ANXA3P12429 323 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 ELAVL4P26378 380 aaKnown RBP14.65□□□□□ -0.06
SMG6-207ENST00000570756 ETV3P41162 512 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 DGKGP49619 791 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 LIM2P55344 173 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 FABP5Q01469 135 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 BCL2L1Q07817 233 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 FCN2Q15485 313 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 FAM110CQ1W6H9 321 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 ZNF385BQ569K4 471 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 SYT14P1Q58G82 188 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 CD200R1LQ6Q8B3 271 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 USP45Q70EL2 814 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 GPR156Q8NFN8 814 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 LHFPL5Q8TAF8 219 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 HDHD2Q9H0R4 259 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 LIN7BQ9HAP6 207 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 ZSCAN32Q9NX65 697 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 ACSL6Q9UKU0 697 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 Q9Y3F1 56 aa14.65□□□□□ -0.06
SMG6-207ENST00000570756 A0A0A6YYJ9 748 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 OR6C75A6NL08 312 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 E7EQ34 232 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 SYN3O14994 580 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 SH3BP5O60239 455 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ETHE1O95571 254 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 H1F0P07305 194 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 BDKRB1P46663 353 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 SMIM11AP58511 58 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ALDH6A1Q02252 535 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 ZNF763Q0D2J5 394 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ZNF267Q14586 743 aaPredicted RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 SNAPC1Q16533 368 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 CDKN3Q16667 212 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 SLC5A12Q1EHB4 618 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 FLYWCH1Q4VC44 716 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 CLLU1Q5K131 121 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 TYW3Q6IPR3 259 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 REEP3Q6NUK4 255 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 TMEM65Q6PI78 240 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 TRILQ7L0X0 811 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 WDR53Q7Z5U6 358 aaPredicted RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 THOC6Q86W42 341 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMG6-207ENST00000570756 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 LRR1Q96L50 414 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 TM6SF2Q9BZW4 377 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 RNF186Q9NXI6 227 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ZNF224Q9NZL3 707 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 DNMT3AQ9Y6K1 912 aaPredicted RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 PRKYO43930 277 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 GPR37L1O60883 481 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 SH3BGRLO75368 114 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 RECKO95980 971 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 RPLP2P05387 115 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 GAAP10253 952 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ATF4P18848 351 aaPredicted RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 CORO1AP31146 461 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 OR1G1P47890 313 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 AVPR1BP47901 424 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 DSTNP60981 165 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 RAB40BQ12829 278 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 SNTA1Q13424 505 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 MRPL58Q14197 206 aaKnown RBP14.64□□□□□ -0.07
SMG6-207ENST00000570756 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMG6-207ENST00000570756 SEC23BQ15437 767 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 GRK1Q15835 563 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 PLEKHS1Q5SXH7 462 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ADGRF1Q5T601 910 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 GPR139Q6DWJ6 353 aa14.64□□□□□ -0.07
SMG6-207ENST00000570756 ANKS3Q6ZW76 656 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms