RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ATP5A1P25705 553 aaKnown RBP12.57□□□□□ -0.4
CLK3-218ENST00000566926 CERS1P27544 350 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 HTR6P50406 440 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 SLC26A5P58743 744 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 ARG2P78540 354 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 BTG2P78543 158 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 SLC13A2Q13183 592 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 CUL3Q13618 768 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 SPIN4Q56A73 249 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 B3GNTL1Q67FW5 361 aaPredicted RBP12.57□□□□□ -0.4
CLK3-218ENST00000566926 OR4C11Q6IEV9 310 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 ZGRF1Q86YA3 2104 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 SIRT6Q8N6T7 355 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 ACOT4Q8N9L9 421 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 RP9Q8TA86 221 aaKnown RBP12.57□□□□□ -0.4
CLK3-218ENST00000566926 TSPEARQ8WU66 669 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 PSMF1Q92530 271 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 HAS2Q92819 552 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 MTERF1Q99551 399 aaKnown RBP12.57□□□□□ -0.4
CLK3-218ENST00000566926 ACPTQ9BZG2 426 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 BRINP2Q9C0B6 783 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 RNF32Q9H0A6 362 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 CLMPQ9H6B4 373 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
CLK3-218ENST00000566926 DMRT3Q9NQL9 472 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 AIG1Q9NVV5 245 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 AHSPQ9NZD4 102 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 ZIM2Q9NZV7 527 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 TAGLN3Q9UI15 199 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 SLC12A4Q9UP95 1085 aa12.57□□□□□ -0.4
CLK3-218ENST00000566926 COPG1Q9Y678 874 aaKnown RBP12.57□□□□□ -0.4
CLK3-218ENST00000566926 IGKV3D-11A0A0A0MRZ8 115 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SAGE2PA6NJ88 616 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 CTNSO60931 367 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 PEX11AO75192 247 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SCELO95171 688 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 ESRRAP11474 423 aaPredicted RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 PRPS2P11908 318 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 MAOAP21397 527 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 TLX1P31314 330 aaPredicted RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 CD97P48960 835 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 RPS13P62277 151 aaKnown RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 KLF10Q13118 480 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 BIKQ13323 160 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 UBAP2LQ14157 1087 aaKnown RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 ZNF169Q14929 603 aaPredicted RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 INPP5JQ15735 1006 aaPredicted RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 MEP1AQ16819 746 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 PDCD4Q53EL6 469 aaKnown RBP12.56□□□□□ -0.4
CLK3-218ENST00000566926 SGO1Q5FBB7 561 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 H3F3CQ6NXT2 135 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SCUBE1Q8IWY4 988 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SHISA5Q8N114 240 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SLC5A8Q8N695 610 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 Q8NA96 180 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 OR2T11Q8NH01 316 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SUN3Q8TAQ9 357 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 OR51B5Q9H339 312 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 NECTIN3Q9NQS3 549 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 SIRT5Q9NXA8 310 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 STMN3Q9NZ72 180 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 ARMCX1Q9P291 453 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 MAP10Q9P2G4 905 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 PHF11Q9UIL8 331 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 VPS4AQ9UN37 437 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 PTGDR2Q9Y5Y4 395 aa12.56□□□□□ -0.4
CLK3-218ENST00000566926 TRAV17A0A0B4J275 112 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 BBIP1A8MTZ0 92 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 A8MUI8 341 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 CYR61O00622 381 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 SH3BGRLO75368 114 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 SEC22BO75396 215 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 CELA2AP08217 269 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 CPN2P22792 545 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 RPL38P63173 70 aaKnown RBP12.55□□□□□ -0.4
CLK3-218ENST00000566926 ACSM2AQ08AH3 577 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 STX4Q12846 297 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 STX5Q13190 355 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 SERTAD2Q14140 314 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 COQ5Q5HYK3 327 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 TMEM198Q66K66 360 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 ACSM2BQ68CK6 577 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 RPUSD3Q6P087 351 aaKnown RBP12.55□□□□□ -0.4
CLK3-218ENST00000566926 ZNF793Q6ZN11 406 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 UBE3DQ7Z6J8 389 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 LGI4Q8N135 537 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 ZCCHC7Q8N3Z6 543 aaKnown RBP12.55□□□□□ -0.4
CLK3-218ENST00000566926 FAM47BQ8NA70 645 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 GLB1L3Q8NCI6 653 aaPredicted RBP12.55□□□□□ -0.4
CLK3-218ENST00000566926 GALNT11Q8NCW6 608 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 FCRL1Q96LA6 429 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLK3-218ENST00000566926 AGPAT4Q9NRZ5 378 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 FARSBQ9NSD9 589 aaKnown RBP12.55□□□□□ -0.4
CLK3-218ENST00000566926 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLK3-218ENST00000566926 KCMF1Q9P0J7 381 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 LUZP4Q9P127 313 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms