RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CCL4L1Q8NHW4 92 aa17.71■□□□□ 0.43
MSLN-207ENST00000566549 SLC28A3Q9HAS3 691 aa17.71■□□□□ 0.43
MSLN-207ENST00000566549 RHBDL2Q9NX52 303 aa17.71■□□□□ 0.43
MSLN-207ENST00000566549 PSORS1C1Q9UIG5 152 aa17.71■□□□□ 0.43
MSLN-207ENST00000566549 HEATR5BQ9P2D3 2071 aa17.71■□□□□ 0.43
MSLN-207ENST00000566549 A0A1W2PR48 441 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 PRSS38A1L453 326 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 M0R3G1 203 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 TPST2O60704 377 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 NME6O75414 186 aaPredicted RBP17.7■□□□□ 0.42
MSLN-207ENST00000566549 IGFBP1P08833 259 aaPredicted RBP17.7■□□□□ 0.42
MSLN-207ENST00000566549 STSP08842 583 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 NR2F1P10589 423 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 CD36P16671 472 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 HIST1H1TP22492 207 aaPredicted RBP17.7■□□□□ 0.42
MSLN-207ENST00000566549 CBLP22681 906 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 SEC23BQ15437 767 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 COLEC12Q5KU26 742 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 TCTN3Q6NUS6 607 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 NATD1Q8N6N6 113 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 SIGLEC11Q96RL6 698 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 RAB11FIP5Q9BXF6 653 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 LMAN2LQ9H0V9 348 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 ANKRA2Q9H9E1 313 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 C11orf16Q9NQ32 467 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 ACSS1Q9NUB1 689 aaPredicted RBP17.7■□□□□ 0.42
MSLN-207ENST00000566549 M0R3H8 397 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 MAN2B1O00754 1011 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 CHMP24386 653 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 NTSP30990 170 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 TNFRSF4P43489 277 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 HMGA2P52926 109 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 LASP1Q14847 261 aaKnown RBP17.7■□□□□ 0.42
MSLN-207ENST00000566549 ABHD17CQ6PCB6 329 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 TTLQ8NG68 377 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 FAIM2Q9BWQ8 316 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 C1QTNF7Q9BXJ2 289 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 MCOLN1Q9GZU1 580 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 CTPS2Q9NRF8 586 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 SEMA3GQ9NS98 782 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 MS4A12Q9NXJ0 267 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 TAS2R16Q9NYV7 291 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 P2RX2Q9UBL9 471 aa17.7■□□□□ 0.42
MSLN-207ENST00000566549 TMEM247A6NEH6 219 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 CLCA1A8K7I4 914 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 DDX5P17844 614 aaKnown RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 LIPAP38571 399 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 TPRG1LQ5T0D9 272 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 TMEM107Q6UX40 140 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 TSACCQ96A04 125 aaPredicted RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 MVB12BQ9H7P6 319 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 KCND3Q9UK17 655 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 CKAP5Q14008 2032 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 PRR19A6NJB7 356 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 PRICKLE3O43900 615 aaPredicted RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 OR10H3O60404 316 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 NADKO95544 446 aaPredicted RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 AIFM1O95831 613 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 ATP5A1P25705 553 aaKnown RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 PIN1Q13526 163 aaPredicted RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 NR1D2Q14995 579 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 ZIC1Q15915 447 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 BTLAQ7Z6A9 289 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 STX19Q8N4C7 294 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 DNAJC5GQ8N7S2 189 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 LCN9Q8WX39 176 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 OR1E3Q8WZA6 343 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 MRPL38Q96DV4 380 aaKnown RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 CNRIP1Q96F85 164 aaPredicted RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 OR2M4Q96R27 311 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 ZNF607Q96SK3 696 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 RMI1Q9H9A7 625 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 EQTNQ9NQ60 294 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 PRDM7Q9NQW5 492 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 APOBEC3BQ9UH17 382 aaKnown RBP17.69■□□□□ 0.42
MSLN-207ENST00000566549 TMCC3Q9ULS5 477 aa17.69■□□□□ 0.42
MSLN-207ENST00000566549 BTN3A3O00478 584 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 SLC22A1O15245 554 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 DRD2P14416 443 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 GABRB1P18505 474 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 TGFBR2P37173 567 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 KCNJ5P48544 419 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 PXNP49023 591 aaPredicted RBP17.68■□□□□ 0.42
MSLN-207ENST00000566549 SNRPNP63162 240 aaKnown RBP17.68■□□□□ 0.42
MSLN-207ENST00000566549 TMEM35AQ53FP2 167 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 ZNF770Q6IQ21 691 aaPredicted RBP17.68■□□□□ 0.42
MSLN-207ENST00000566549 DEPDC4Q8N2C3 294 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 MYDGFQ969H8 173 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 SIPA1Q96FS4 1042 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 ZNF354BQ96LW1 612 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 ROGDIQ9GZN7 287 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 QRSL1Q9H0R6 528 aaKnown RBP17.68■□□□□ 0.42
MSLN-207ENST00000566549 ASB4Q9Y574 426 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 PDE9AO76083 593 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 CDK1P06493 297 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 ELAVL4P26378 380 aaKnown RBP17.68■□□□□ 0.42
MSLN-207ENST00000566549 CNR2P34972 360 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 CDC42P60953 191 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 TFF2Q03403 129 aa17.68■□□□□ 0.42
MSLN-207ENST00000566549 TMCO5AQ8N6Q1 288 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms