RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	OXSR1	O95747	527 aa	Predicted RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	FGF19	O95750	216 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	PRNP	P04156	253 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CYP17A1	P05093	508 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	HBQ1	P09105	142 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	ERG	P11308	486 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	ITGB7	P26010	798 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	TNFSF8	P32971	234 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	RPS19	P39019	145 aa	Known RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CRYBB2	P43320	205 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	MEDAG	Q5VYS4	303 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	FAM92B	Q6ZTR7	304 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	COMTD1	Q86VU5	262 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CACTIN-AS1	Q8N1I8	211 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	IL17RD	Q8NFM7	739 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	PHOSPHO2	Q8TCD6	241 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLC7A13	Q8TCU3	470 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	NXPE3	Q969Y0	559 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	TRMT61A	Q96FX7	289 aa	Known RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	ZNF354B	Q96LW1	612 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	NEUROD4	Q9HD90	331 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	DYRK4	Q9NR20	520 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	WBP11	Q9Y2W2	641 aa	Known RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	SNX11	Q9Y5W9	270 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507		A8MU76	341 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	HEPACAM2	A8MVW5	462 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	PRRT4	C9JH25	899 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	LOC110117498-PIK3R3	F6TDL0	507 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	FAAH	O00519	579 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	H1F0	P07305	194 aa	Known RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	GSTT2	P0CG29	244 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	GSTT2B	P0CG30	244 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	KEL	P23276	732 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	HSPB3	Q12988	150 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	NCF4	Q15080	339 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	SPHAR	Q15513	63 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	C9orf64	Q5T6V5	341 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMEM53	Q6P2H8	277 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	PDZD3	Q86UT5	571 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CELF2-AS1	Q8N7Q2	184 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	KLHL6	Q8WZ60	621 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	SMPDL3A	Q92484	453 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	PIK3R3	Q92569	461 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMEM80	Q96HE8	168 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CTRC	Q99895	268 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLC30A2	Q9BRI3	323 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	CNPPD1	Q9BV87	410 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	ASPN	Q9BXN1	380 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	C3orf14	Q9HBI5	128 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	C14orf119	Q9NWQ9	140 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	ERVK13-1	Q9NX77	482 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	TAC3	Q9UHF0	121 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	TRAPPC4	Q9Y296	219 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	ANHX	E9PGG2	379 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507		H3BQ06	376 aa	Predicted RBP	12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	CAPN5	O15484	640 aa	Predicted RBP	12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	LINC01565	O15544	149 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMPRSS11D	O60235	418 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	CD72	P21854	359 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	CASP3	P42574	277 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	XK	P51811	444 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	ST8SIA6	P61647	398 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	ZNF91	Q05481	1191 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	KRR1	Q13601	381 aa	Known RBP	12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	HEPACAM	Q14CZ8	416 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	FAM78A	Q5JUQ0	283 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	DEF8	Q6ZN54	512 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	SPATC1	Q76KD6	591 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	C17orf64	Q86WR6	236 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	UCN3	Q969E3	161 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	MENT	Q9BUN1	341 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	CCDC32	Q9BV29	185 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	HOXD1	Q9GZZ0	328 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	MVB12B	Q9H7P6	319 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLC23A2	Q9UGH3	650 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	TBC1D24	Q9ULP9	559 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMEM98	Q9Y2Y6	226 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	ATG2A	Q2TAZ0	1938 aa		12.46	□□□□□ -0.41
SCAPER-215	ENST00000565507	CACNB4	O00305	520 aa	Predicted RBP	12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	DYRK3	O43781	588 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	VEGFD	O43915	354 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	ADRB3	P13945	408 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	DDX5	P17844	614 aa	Known RBP	12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	MFSD4B	Q5TF39	518 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	RNLS	Q5VYX0	342 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	GDPGP1	Q6ZNW5	385 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	DCUN1D3	Q8IWE4	304 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	SLC34A3	Q8N130	599 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	NATD1	Q8N6N6	113 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	CELF5	Q8N6W0	485 aa	Known RBP	12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	NANOGP1	Q8N7R0	232 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	TMIE	Q8NEW7	156 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	OR8J1	Q8NGP2	316 aa		12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	TFG	Q92734	400 aa	Predicted RBP	12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	TREX2	Q9BQ50	279 aa	Predicted RBP	12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	POLR2J3	Q9H1A7	115 aa	Known RBP	12.46	□□□□□ -0.42
SCAPER-215	ENST00000565507	WASH6P	Q9NQA3	447 aa		12.46	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms