RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LGMNQ99538 433 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 SHARPINQ9H0F6 387 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 MTIF3Q9H2K0 278 aaKnown RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 VCXQ9H320 206 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 LZTFL1Q9NQ48 299 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 EQTNQ9NQ60 294 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 PRMT7Q9NVM4 692 aaPredicted RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 ZNHIT6Q9NWK9 470 aaKnown RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 AATFQ9NY61 560 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHD9-212ENST00000564641 HOXC10Q9NYD6 342 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 UTP6Q9NYH9 597 aaKnown RBP3.43□□□□□ -1.86
CHD9-212ENST00000564641 SPATA7Q9P0W8 599 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 DNAJB9Q9UBS3 223 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 POMT1Q9Y6A1 747 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 GRIN2DO15399 1336 aa3.43□□□□□ -1.86
CHD9-212ENST00000564641 NCOR1O75376 2440 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 A0A087WWV3 80 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 A0A1W2PPM1 405 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SLC15A5A6NIM6 579 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CCT8L1PA6NM43 557 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SLC30A4O14863 429 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 FMO6PO60774 539 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 PFDN1O60925 122 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ATP6V1G1O75348 118 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CEACAM4O75871 244 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 KRT33AO76009 404 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ZWINTO95229 277 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 GOSR1O95249 250 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SLC25A27O95847 323 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 FAM107AO95990 144 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 BCL10O95999 233 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 GSTA1P08263 222 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CLTAP09496 248 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 FAM200BP0CF97 657 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 PRKAR1AP10644 381 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ADRA2CP18825 462 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 EEF1B2P24534 225 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 PCK1P35558 622 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 MDH1P40925 334 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 ZFP36L2P47974 494 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 CAPZA1P52907 286 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 MYL5Q02045 173 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 TAF10Q12962 218 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 HSPB3Q12988 150 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ZRANB3Q5FWF4 1079 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 XKR3Q5GH77 459 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SPDYCQ5MJ68 293 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 TEX38Q6PEX7 206 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 IYDQ6PHW0 289 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 LINC00696Q6ZRV3 163 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 PIWIL3Q7Z3Z3 882 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 SPATA19Q7Z5L4 167 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ABI3BPQ7Z7G0 1075 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SLC47A2Q86VL8 602 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 FBXO39Q8N4B4 442 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CHCHD4Q8N4Q1 142 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 DEFB123Q8N688 67 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 APOBEC4Q8WW27 367 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 MAIP1Q8WWC4 291 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SSMEM1Q8WWF3 244 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ROBO4Q8WZ75 1007 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 TOMM40LQ969M1 308 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 PPP1R14BQ96C90 147 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 PANX2Q96RD6 677 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 FERMT1Q9BQL6 677 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CRNKL1Q9BZJ0 848 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 HOXD1Q9GZZ0 328 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 LSG1Q9H089 658 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 GOLPH3LQ9H4A5 285 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CNOT10Q9H9A5 744 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 CHST11Q9NPF2 352 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 B3GAT2Q9NPZ5 323 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 DPP3Q9NY33 737 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 CDH7Q9ULB5 785 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 PAIP2BQ9ULR5 123 aaKnown RBP3.42□□□□□ -1.86
CHD9-212ENST00000564641 TMCO1Q9UM00 188 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 WIPI2Q9Y4P8 454 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 MYO9BQ13459 2157 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 ATAD5Q96QE3 1844 aa3.42□□□□□ -1.86
CHD9-212ENST00000564641 SZT2Q5T011 3432 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 LOC285556D6RIA3 1793 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 A0A0U1RQK1 487 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 A0A1B0GVG6 124 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ARHGEF37A1IGU5 675 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZNF320A2RRD8 509 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TRIM64A6NGJ6 449 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TRIM64BA6NI03 449 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 F8VZ95 297 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 O00370 1275 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 PTGESO14684 152 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 IDH1O75874 414 aaKnown RBP3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZFYP08048 801 aaPredicted RBP3.41□□□□□ -1.86
CHD9-212ENST00000564641 SUPT20HL2P0C7V6 817 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 NQO1P15559 274 aaKnown RBP3.41□□□□□ -1.86
CHD9-212ENST00000564641 CYP2B6P20813 491 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 PSMA3P25788 255 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 PTGER4P35408 488 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 MTHFRP42898 656 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 CDH13P55290 713 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 SH3BGRP55822 239 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms