RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ULK4Q96C45 1275 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 SNRNP40Q96DI7 357 aaKnown RBP3.35□□□□□ -1.87
UBR1-205ENST00000564540 ZMAT2Q96NC0 199 aaKnown RBP3.35□□□□□ -1.87
UBR1-205ENST00000564540 TMEM206Q9H813 350 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 TECRQ9NZ01 308 aaKnown RBP3.35□□□□□ -1.87
UBR1-205ENST00000564540 SPG21Q9NZD8 308 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 A0A0U1RQG5 324 aaPredicted RBP3.34□□□□□ -1.87
UBR1-205ENST00000564540 HDAC3O15379 428 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 PGAM2P15259 253 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 FNTAP49354 379 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 RBP5P82980 135 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 CCDC158Q5M9N0 1113 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.87
UBR1-205ENST00000564540 HOOK3Q86VS8 718 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 TUSC5Q8IXB3 177 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 RELL2Q8NC24 303 aaPredicted RBP3.34□□□□□ -1.87
UBR1-205ENST00000564540 GOLGA5Q8TBA6 731 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 VN1R17PQ8TDU5 208 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 PANX3Q96QZ0 392 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 S1PR3Q99500 378 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 ST6GALNAC5Q9BVH7 336 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 RNF41Q9H4P4 317 aaPredicted RBP3.34□□□□□ -1.87
UBR1-205ENST00000564540 SLC25A19Q9HC21 320 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 GDF3Q9NR23 364 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 PLSCR3Q9NRY6 295 aa3.34□□□□□ -1.87
UBR1-205ENST00000564540 CCER2I3L3R5 266 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 TNFSF11O14788 317 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 CPNE6O95741 557 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 NUDT17P0C025 328 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 B4GALT1P15291 398 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 MAGEA9P43362 315 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 RGRP47804 291 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 MFAP2P55001 183 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 HEPACAMQ14CZ8 416 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 TGIF1Q15583 401 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 ACER2Q5QJU3 275 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 GCNT7Q6ZNI0 430 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 SIAH3Q8IW03 269 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 LAX1Q8IWV1 398 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 UBQLNLQ8IYU4 475 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 NUP93Q8N1F7 819 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 ARL14Q8N4G2 192 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 AP2M1Q96CW1 435 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 CCT8L2Q96SF2 557 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 ZDHHC6Q9H6R6 413 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 ADGRL4Q9HBW9 690 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 SEC14L4Q9UDX3 406 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 MOKQ9UQ07 419 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 ERVK-19Q9WJR5 959 aa3.33□□□□□ -1.88
UBR1-205ENST00000564540 CFAP65Q6ZU64 1925 aaKnown RBP3.32□□□□□ -1.88
UBR1-205ENST00000564540 IGHV3OR16-12A0A075B7B8 117 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 K7ERI5 159 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 TTI1O43156 1089 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 TNFSF10P50591 281 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 ARHGDIAP52565 204 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 NDST1P52848 882 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 BFSP1Q12934 665 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 SLC10A1Q14973 349 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 GBP6Q6ZN66 633 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 CCDC83Q8IWF9 413 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 FBXO16Q8IX29 292 aaPredicted RBP3.32□□□□□ -1.88
UBR1-205ENST00000564540 CRYGNQ8WXF5 182 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 PIWIL1Q96J94 861 aaKnown RBP3.32□□□□□ -1.88
UBR1-205ENST00000564540 Q9HAA7 133 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 PRODH2Q9UF12 536 aa3.32□□□□□ -1.88
UBR1-205ENST00000564540 EFCAB7A8K855 629 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 CRCPO75575 148 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 STBD1O95210 358 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 PRAMEF12O95522 483 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 CHRNGP07510 517 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 SBK2P0C263 348 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 P0C879 139 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 SLC35E2P0CK97 266 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 MGMTP16455 207 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 SERPINB6P35237 376 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 TKTL1P51854 596 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ST8SIA6P61647 398 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ANKRD20A4Q4UJ75 823 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ANKRD20A8PQ5CZ79 823 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ANKRD20A2Q5SQ80 823 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ANKRD20A1Q5TYW2 823 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 C1orf189Q5VU69 101 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ANKRD20A3Q5VUR7 823 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 ZNF544Q6NX49 715 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 GALNTL5Q7Z4T8 443 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 GPATCH11Q8N954 259 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 FBXO25Q8TCJ0 367 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 TEKT1Q969V4 418 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 CXorf58Q96LI9 332 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 GUCD1Q96NT3 240 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 NTMT1Q9BV86 223 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 UTP14AQ9BVJ6 771 aaKnown RBP3.31□□□□□ -1.88
UBR1-205ENST00000564540 IKZF5Q9H5V7 419 aa3.31□□□□□ -1.88
UBR1-205ENST00000564540 DNAJC17Q9NVM6 304 aaKnown RBP3.31□□□□□ -1.88
UBR1-205ENST00000564540 TRABD2BA6NFA1 517 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 MEI4A8MW99 385 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms