RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	RIMBP3C	A6NJZ7	1639 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RIMBP3B	A6NNM3	1639 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RIMBP3	Q9UFD9	1639 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RPP40	O75818	363 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM63A	O94886	807 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	HPGD	P15428	266 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RPL10	P27635	214 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	CCR7	P32248	378 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TFAP2E	Q6VUC0	442 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	UTS2B	Q765I0	119 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TM6SF2	Q9BZW4	377 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC32A1	Q9H598	525 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	STARD7	Q9NQZ5	370 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288		F5H5P2	479 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	ARHGAP33	O14559	1287 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	SCAMP1	O15126	338 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	BCKDHA	P12694	445 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RPS14	P62263	151 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	GINS1	Q14691	196 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	CRB2	Q5IJ48	1285 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	AKR7L	Q8NHP1	331 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RBM14	Q96PK6	669 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	OR2A14	Q96R47	310 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RNF146	Q9NTX7	359 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF670-ZNF695	F2Z2N8	137 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	CILP	O75339	1184 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	YWHAQ	P27348	245 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	ACOT7L	Q6ZUV0	252 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	PQLC3	Q8N755	202 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TAAR1	Q96RJ0	339 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	ASAH2	Q9NR71	780 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	EPHA6	Q9UF33	1036 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TSPAN16	Q9UKR8	245 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	FZD4	Q9ULV1	537 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	EGF	P01133	1207 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF273	Q14593	569 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RIPPLY2	Q5TAB7	128 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	GLIS1	Q8NBF1	620 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM41A	Q96HV5	264 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	BEX2	Q9BXY8	128 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	CD244	Q9BZW8	370 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	HMX1	Q9NP08	348 aa	Predicted RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	KLHL9	Q9P2J3	617 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TBC1D24	Q9ULP9	559 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	WIF1	Q9Y5W5	379 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	TRIOBP	Q9H2D6	2365 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	NARS	O43776	548 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	HRH2	P25021	359 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	AZGP1	P25311	298 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	MLLT10	P55197	1068 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	C22orf42	Q6IC83	251 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	RTL6	Q6ICC9	239 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC38A6	Q8IZM9	456 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	LNX2	Q8N448	690 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	SMDT1	Q9H4I9	107 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288		A0A0A6YYJ9	748 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	C17orf113	A0A1B0GUU1	675 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	VIP	P01282	170 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	GP2	P55259	537 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	VLDLR	P98155	873 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	PPIG	Q13427	754 aa	Known RBP eCLIP	4.08	□□□□□ -1.76	4e-7	■■□□□ 12.8
MACF1-231	ENST00000564288	SULF1	Q8IWU6	871 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	AQP11	Q8NBQ7	271 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	NOL4L	Q96MY1	436 aa	Predicted RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	PURG	Q9UJV8	347 aa	Known RBP	4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	SH2B3	Q9UQQ2	575 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	DYRK1B	Q9Y463	629 aa		4.08	□□□□□ -1.76
MACF1-231	ENST00000564288	MYH1	P12882	1939 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MYH2	Q9UKX2	1941 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MYH4	Q9Y623	1939 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	PTPN3	P26045	913 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	HMGA2	P52926	109 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FKBP1B	P68106	108 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	LPCAT3	Q6P1A2	487 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FAM50B	Q9Y247	325 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MED16	Q9Y2X0	877 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288		V9GYS6	101 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SMIM6	P0DI80	62 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ACVR2A	P27037	513 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CACNG1	Q06432	222 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MFSD9	Q8NBP5	474 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	OR2L2	Q8NH16	312 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	OR10A4	Q9H209	315 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SPATA31A5	Q5VU36	1347 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SPATA31A7	Q8IWB4	1347 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CACNG3	O60359	315 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CHRNA4	P43681	627 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GALNT2	Q10471	571 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ST3GAL3	Q11203	375 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	NDUFAF7	Q7L592	441 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	PHACTR4	Q8IZ21	702 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MED17	Q9NVC6	651 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FZD7	O75084	574 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RAB3D	O95716	219 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	KIR2DL3	P43628	341 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RAN	P62826	216 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms