RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR10G2Q8NGC3 310 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 KLHL6Q8WZ60 621 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 TM4SF19Q96DZ7 209 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ORAI3Q9BRQ5 295 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 TRPC4Q9UBN4 977 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ENTPD4Q9Y227 616 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ENPP4Q9Y6X5 453 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 LOC105369274A0A096LPK9 316 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 LOC102723532A0A0G2JNH3 316 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 E9PQ18 207 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 ABCB7O75027 752 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 GUCY1B2O75343 617 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 CPNE6O95741 557 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 MATN1P21941 496 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 FMO3P31513 532 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 LIM2P55344 173 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 NPRL3Q12980 569 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 SKIV2LQ15477 1246 aaKnown RBP18.04■□□□□ 0.48
SMPD3-203ENST00000563226 XAF1Q6GPH4 301 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 OR4N4Q8N0Y3 316 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 SHISA5Q8N114 240 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 LGI4Q8N135 537 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 OR9Q2Q8NGE9 314 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 XAGE5Q8WWM1 108 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 UBE2FQ969M7 185 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 PIP5K1AQ99755 562 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 WFDC6Q9BQY6 131 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 FANCEQ9HB96 536 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 GPR27Q9NS67 375 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 ACER3Q9NUN7 267 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 TMEM74BQ9NUR3 256 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 PILRAQ9UKJ1 303 aa18.04■□□□□ 0.48
SMPD3-203ENST00000563226 TOR1BO14657 336 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 PCDH17O14917 1159 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 SLC35G6P0C7Q6 338 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 ITGA2P17301 1181 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 CD6P30203 668 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 PPP1CAP62136 330 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 TDGQ13569 410 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 B3GNT8Q7Z7M8 397 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 SPARTQ8N0X7 666 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 ZNF681Q96N22 645 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 SLC6A18Q96N87 628 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 NIPSNAP1Q9BPW8 284 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 TREX2Q9BQ50 279 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-203ENST00000563226 GSDMCQ9BYG8 508 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 CXorf21Q9HAI6 301 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 LMAN1LQ9HAT1 526 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 POT1Q9NUX5 634 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 FFAR1O14842 300 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 SEMA7AO75326 666 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 NME6O75414 186 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-203ENST00000563226 IFNW1P05000 195 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 LIMS1P48059 325 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 GABARAPL2P60520 117 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 RPP38P78345 283 aaKnown RBP18.03■□□□□ 0.48
SMPD3-203ENST00000563226 TGM3Q08188 693 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 FUT5Q11128 374 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 LASP1Q14847 261 aaKnown RBP18.03■□□□□ 0.48
SMPD3-203ENST00000563226 LTB4RQ15722 352 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 MICAQ29983 383 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 GPR153Q6NV75 609 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 TMEM64Q6YI46 380 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 TAF8Q7Z7C8 310 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 HMGN2P46Q86SG4 172 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 COMTD1Q86VU5 262 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 SETD9Q8NE22 299 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 OR4D11Q8NGI4 311 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 OR9A2Q8NGT5 310 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 ISOC1Q96CN7 298 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 C16orf58Q96GQ5 468 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 COL21A1Q96P44 957 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 PITX2Q99697 317 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 GABARAPL3Q9BY60 117 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 LYARQ9NX58 379 aaKnown RBP18.03■□□□□ 0.48
SMPD3-203ENST00000563226 ZSCAN32Q9NX65 697 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 P2RX2Q9UBL9 471 aa18.03■□□□□ 0.48
SMPD3-203ENST00000563226 ANGPTL1O95841 491 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 HMGN2P05204 90 aaKnown RBP18.02■□□□□ 0.48
SMPD3-203ENST00000563226 SMIM10L1P0DMW3 83 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 NR2F6P10588 404 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 CSNK2A2P19784 350 aaPredicted RBP18.02■□□□□ 0.48
SMPD3-203ENST00000563226 GSSP48637 474 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 DEFB134Q4QY38 66 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 RBM45Q8IUH3 476 aaKnown RBP18.02■□□□□ 0.48
SMPD3-203ENST00000563226 DEFB119Q8N690 84 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 TSTD1Q8NFU3 115 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 ZFAND2BQ8WV99 257 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 SMIM10Q96HG1 83 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 C10orf90Q96M02 699 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 CSF3RQ99062 836 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 SEMA3GQ9NS98 782 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 ANKMY1Q9P2S6 941 aa18.02■□□□□ 0.48
SMPD3-203ENST00000563226 MRPS2Q9Y399 296 aaKnown RBP18.02■□□□□ 0.48
SMPD3-203ENST00000563226 TRIOBPQ9H2D6 2365 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 A0A1W2PPC4 97 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 PTGES3LE9PB15 166 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 MC3RP41968 323 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 KCNC4Q03721 635 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 TOP3AQ13472 1001 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms