RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 THAP3Q8WTV1 239 aaPredicted RBP12.48□□□□□ -0.41
SPG7-207ENST00000563218 OR4K3Q96R72 315 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 HAUS8Q9BT25 410 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 NMUR2Q9GZQ4 415 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 CDCP1Q9H5V8 836 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 MMP25Q9NPA2 562 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 TMEM184CQ9NVA4 438 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 SNX6Q9UNH7 406 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 PCDHGB6Q9Y5F9 930 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 NF1P21359 2839 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 NAV3Q8IVL0 2385 aa12.48□□□□□ -0.41
SPG7-207ENST00000563218 KCNE1BA0A087WTH5 132 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 SP1P08047 785 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 CDH1P12830 882 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 AGAP20933 346 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 TPP2P29144 1249 aaPredicted RBP12.47□□□□□ -0.41
SPG7-207ENST00000563218 PTGER1P34995 402 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 RFC3P40938 356 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 NR0B1P51843 470 aaKnown RBP12.47□□□□□ -0.41
SPG7-207ENST00000563218 SMSP52788 366 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 OC90Q02509 493 aaPredicted RBP12.47□□□□□ -0.41
SPG7-207ENST00000563218 PCDH1Q08174 1060 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 DMTNQ08495 405 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 EXT1Q16394 746 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 CPSF6Q16630 551 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPG7-207ENST00000563218 SPDYAQ5MJ70 313 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 TCHHL1Q5QJ38 904 aaPredicted RBP12.47□□□□□ -0.41
SPG7-207ENST00000563218 FAM219BQ5XKK7 198 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 SCIMPQ6UWF3 145 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 LCTLQ6UWM7 567 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 YTHDF3Q7Z739 585 aaKnown RBP12.47□□□□□ -0.41
SPG7-207ENST00000563218 TMPRSS11BQ86T26 416 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 ASPGQ86U10 573 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 SPNS1Q9H2V7 528 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 ANKHQ9HCJ1 492 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 FREM3P0C091 2139 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
SPG7-207ENST00000563218 ATP6AP2A0A1C7CYW4 349 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 SLC28A1O00337 649 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 MANBAO00462 879 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ASNA1O43681 348 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ULK1O75385 1050 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ATP6AP2O75787 350 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 UBOX5O94941 541 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 CYC1P08574 325 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 CD46P15529 392 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ABOP16442 354 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 NPPBP16860 134 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 HNF4AP41235 474 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 HTR6P50406 440 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 DOC2AQ14183 400 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 NSDHLQ15738 373 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 TBCCQ15814 346 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 MAPKAPK3Q16644 382 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 XKR7Q5GH72 579 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 FAM91A1Q658Y4 838 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 GRHL2Q6ISB3 625 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 SLC25A25Q6KCM7 469 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 RNF165Q6ZSG1 346 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 C17orf64Q86WR6 236 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 DOLPP1Q86YN1 238 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 MARVELD2Q8N4S9 558 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 TMEM178AQ8NBL3 297 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ZNF740Q8NDX6 193 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 PLPP5Q8NEB5 264 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ELP5Q8TE02 316 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 SLC5A11Q8WWX8 675 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 NEIL2Q969S2 332 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 PTCD3Q96EY7 689 aaKnown RBP12.46□□□□□ -0.41
SPG7-207ENST00000563218 C3orf30Q96M34 536 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 DMRTA2Q96SC8 542 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ELOVL6Q9H5J4 265 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 AKTIPQ9H8T0 292 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 SAR1AQ9NR31 198 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 MRGBPQ9NV56 204 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 LRFN1Q9P244 771 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 ZNF490Q9ULM2 529 aaPredicted RBP12.46□□□□□ -0.41
SPG7-207ENST00000563218 PTGDR2Q9Y5Y4 395 aa12.46□□□□□ -0.41
SPG7-207ENST00000563218 C4orf51C9J302 202 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 UBDO15205 165 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 RGS14O43566 566 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 NME2P1O60361 137 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 SLC25A12O75746 678 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 FHP07954 510 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 C1GALT1C1LP0DN25 315 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 LBPP18428 481 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 NME2P22392 152 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 SSTR2P30874 369 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 CASP2P42575 452 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 OR4D2P58180 307 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 TLE4Q04727 773 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
SPG7-207ENST00000563218 LAPTM5Q13571 262 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 HIST2H2ACQ16777 129 aaPredicted RBP12.45□□□□□ -0.42
SPG7-207ENST00000563218 IMPG1Q17R60 797 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 GALNTL6Q49A17 601 aa12.45□□□□□ -0.42
SPG7-207ENST00000563218 KRTCAP3Q53RY4 240 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms