RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 NKRFO15226 690 aaKnown RBP eCLIP4.71□□□□□ -1.66
TCF4-215ENST00000562638 EIF3DO15371 548 aaKnown RBP eCLIP4.71□□□□□ -1.66
TCF4-215ENST00000562638 PLA2G10O15496 165 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 OGG1O15527 345 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 LZTS3O60299 673 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 VPS26AO75436 327 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 RFPL1O75677 317 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 RGS9O75916 674 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 GLCEO94923 617 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 VAMP5O95183 116 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 KAT7O95251 611 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 PRAMEF12O95522 483 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 MLYCDO95822 493 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HPP00738 406 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 IFNA17P01571 189 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 TRBC1P01850 177 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 APOC3P02656 99 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 FGBP02675 491 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 F11P03951 625 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 EPHX1P07099 455 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 BPGMP07738 259 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 THBS1P07996 1170 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HIST1H2AGP0C0S8 130 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 ZSCAN5DPP0CG00 497 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CYP4B1P13584 511 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 INSRRP14616 1297 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ZNF44P15621 663 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ENGP17813 658 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HIST1H2ADP20671 130 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ATP6V1B2P21281 511 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ACO1P21399 889 aaKnown RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 TBXA2RP21731 343 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ITPKAP23677 461 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 GABRR1P24046 479 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 NDUFS1P28331 727 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HOXA13P31271 388 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 HOXC8P31273 242 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CD200P41217 278 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 MAGEA6P43360 314 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 MAP2K4P45985 399 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 RPS9P46781 194 aaKnown RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 RABIFP47224 123 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 RAB5CP51148 216 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CLCN3P51790 818 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CEBPGP53567 150 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CTSCP53634 463 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 TMEM33P57088 247 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 AP3S2P59780 193 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 DNAJB13P59910 316 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 GPC5P78333 572 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HTRA3P83110 453 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 FPGSQ05932 587 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ELP6Q0PNE2 266 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 FABP9Q0Z7S8 132 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 SKP2Q13309 424 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 LRRC32Q14392 662 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 EIF4HQ15056 248 aaKnown RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 TBCEQ15813 527 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 FAM189A2Q15884 450 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ZNF79Q15937 498 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 PCGF3Q3KNV8 242 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 GLYR1Q49A26 553 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 FASTKD1Q53R41 847 aaKnown RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 STRIP1Q5VSL9 837 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 YOD1Q5VVQ6 348 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 HIST2H2AA3Q6FI13 130 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 TAPT1Q6NXT6 567 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 AFTPHQ6ULP2 937 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 NXPE4Q6UWF7 544 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 PAMR1Q6UXH9 720 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 DLK2Q6UY11 383 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HACD2Q6Y1H2 254 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HSDL2Q6YN16 418 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 QSOX2Q6ZRP7 698 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 RNF165Q6ZSG1 346 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 C1orf186Q6ZWK4 172 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CHMP1BQ7LBR1 199 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ZNF551Q7Z340 670 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 RANBP3LQ86VV4 465 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 PTOV1Q86YD1 416 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 DCUN1D3Q8IWE4 304 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ZBTB8OSQ8IWT0 167 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CFAP206Q8IYR0 622 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 PUSL1Q8N0Z8 303 aaKnown RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 SVBPQ8N300 66 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 HDDC3Q8N4P3 179 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ACBD4Q8NC06 268 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 CCDC54Q8NEL0 328 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 OR8J3Q8NGG0 315 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 OR13C2Q8NGS9 318 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 OR1S1Q8NH92 325 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 SNIP1Q8TAD8 396 aaKnown RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.71□□□□□ -1.66
TCF4-215ENST00000562638 ZSCAN18Q8TBC5 510 aaPredicted RBP4.71□□□□□ -1.66
TCF4-215ENST00000562638 CD99L2Q8TCZ2 262 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 C2CD4CQ8TF44 421 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 C16orf78Q8WTQ4 265 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 SLC35F5Q8WV83 523 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 LCN9Q8WX39 176 aa4.71□□□□□ -1.66
TCF4-215ENST00000562638 ACOT11Q8WXI4 607 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms