RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ELMOD1Q8N336 334 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 RAB42Q8N4Z0 105 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 SPC24Q8NBT2 197 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 UXS1Q8NBZ7 420 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 OR7A2PQ8NGA2 310 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 OR4C15Q8NGM1 316 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 ZNF461Q8TAF7 563 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 EXOC6Q8TAG9 804 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 FCAMRQ8WWV6 532 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 FAM3CQ92520 227 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 DYRK2Q92630 601 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 FGF14Q92915 247 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 NODALQ96S42 347 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 TSPAN18Q96SJ8 248 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 ATG101Q9BSB4 218 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 SRD5A3Q9H8P0 318 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 RPF1Q9H9Y2 349 aaKnown RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 EXOC1Q9NV70 894 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 MARCH5Q9NX47 278 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 TRPC4Q9UBN4 977 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 IL36AQ9UHA7 158 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 STK36Q9NRP7 1315 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 FOCADQ5VW36 1801 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 CHD7Q9P2D1 2997 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 MAST4O15021 2626 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 MUC6Q6W4X9 2439 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 ATAD5Q96QE3 1844 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 TRAV18A0A075B6X5 111 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 FAM149AA5PLN7 773 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 CTDSPLO15194 276 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 MSH4O15457 936 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 ST8SIA3O43173 380 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 FMO6PO60774 539 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 PRAF2O60831 178 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 TRMUO75648 421 aaKnown RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 CDC123O75794 336 aaPredicted RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 PLEKHA8P1O95397 391 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 IGKV3-20P01619 116 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 UMODP07911 640 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 YES1P07947 543 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 FRMD6-AS1P0C7T7 363 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 CYP2A7P20853 494 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SSTR1P30872 391 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 RPL9P32969 192 aaKnown RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 CDKN1AP38936 164 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 DNA2P51530 1060 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 B3GALT5-AS1P59052 145 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 AKAP17AQ02040 695 aaKnown RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 UBXN1Q04323 297 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 FCHO2Q0JRZ9 810 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 LAMTOR4Q0VGL1 99 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SMARCB1Q12824 385 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 PLD1Q13393 1074 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SQLEQ14534 574 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 NECTIN1Q15223 517 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 KRTAP24-1Q3LI83 254 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 N4BP2L1Q5TBK1 243 aaPredicted RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 LRRC38Q5VT99 294 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 FAM166AQ6J272 317 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 UGT3A1Q6NUS8 523 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 MEX3BQ6ZN04 569 aaKnown RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 MARK2Q7KZI7 788 aaKnown RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 FCRLAQ7L513 359 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 MIER3Q7Z3K6 550 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 RABEPKQ7Z6M1 372 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 CREBRFQ8IUR6 639 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 MFSD6LQ8IWD5 586 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 CIARTQ8N365 385 aaPredicted RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 FAM89BQ8N5H3 189 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 KLHDC1Q8N7A1 406 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SLC37A3Q8NCC5 494 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SMARCD2Q92925 531 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 FBXO17Q96EF6 278 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SGF29Q96ES7 293 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 CEP170P1Q96L14 293 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 TSSK2Q96PF2 358 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 LPAR4Q99677 370 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 NKX3-1Q99801 234 aaPredicted RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 C17orf62Q9BQA9 187 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 TRIM6Q9C030 488 aaPredicted RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 P2RY12Q9H244 342 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 UBQLN3Q9H347 655 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 C10orf88Q9H8K7 445 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 SLC52A3Q9NQ40 469 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 TXLNGQ9NUQ3 528 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 INTS9Q9NV88 658 aaKnown RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 MTF2Q9Y483 593 aaPredicted RBP3.31□□□□□ -1.88
HERC1-215ENST00000561436 NEUROG3Q9Y4Z2 214 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 ASB3Q9Y575 518 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 DOCK3Q8IZD9 2030 aa3.31□□□□□ -1.88
HERC1-215ENST00000561436 NID2Q14112 1375 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PRRC2BQ5JSZ5 2229 aaKnown RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 DNAH12Q6ZR08 3092 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 IGHV4-4A0A075B6R2 117 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 A0A0B4J203 849 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 MYBPHLA2RUH7 354 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 DDX39AO00148 427 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms