RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SPRED3Q2MJR0 410 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ADGRD1Q6QNK2 874 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 CYP20A1Q6UW02 462 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 RELL1Q8IUW5 271 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 CCDC71Q8IV32 467 aaPredicted RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 PLD6Q8N2A8 252 aaKnown RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 PAQR8Q8TEZ7 354 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 RIT1Q92963 219 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ERVK-6Q9BXR3 956 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 VPS11Q9H270 941 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 NOL11Q9H8H0 719 aaKnown RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 MCCC2Q9HCC0 563 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 KCNJ16Q9NPI9 418 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 RYDENQ9NUL5 291 aaKnown RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 NINJ2Q9NZG7 142 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ERVK-19Q9WJR5 959 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 NKX2-6A6NCS4 301 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 FIGNL2A6NMB9 653 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 AQP7O14520 342 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 CLDN9O95484 217 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 SLC35E2P0CK97 266 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 GALNSP34059 522 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 SLC37A1P57057 533 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 TLE4Q04727 773 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 TECRLQ5HYJ1 363 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 UBAP2Q5T6F2 1119 aaKnown RBP14.95□□□□□ -0.02
SNX1-213ENST00000561026 ZNF585AQ6P3V2 769 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 RNF111Q6ZNA4 994 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 SLC29A4Q7RTT9 530 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 DND1Q8IYX4 353 aaKnown RBP14.95□□□□□ -0.02
SNX1-213ENST00000561026 UCN3Q969E3 161 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 CDK15Q96Q40 435 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 GAL3ST4Q96RP7 486 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 TTYH2Q9BSA4 534 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 FUT8Q9BYC5 575 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 WWTR1Q9GZV5 400 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 WDR41Q9HAD4 459 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 NPDC1Q9NQX5 325 aaPredicted RBP14.95□□□□□ -0.02
SNX1-213ENST00000561026 TNFRSF10DQ9UBN6 386 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 FAM215AQ9Y5M1 114 aa14.95□□□□□ -0.02
SNX1-213ENST00000561026 CHCHD2Q9Y6H1 151 aaPredicted RBP14.95□□□□□ -0.02
SNX1-213ENST00000561026 F8P00451 2351 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 OR6C76A6NM76 312 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 FAM90A27PA6NNH2 459 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 OR7A17O14581 309 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 HCN1O60741 890 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 SEMA3DO95025 777 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 AIFM1O95831 613 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 GBAP04062 536 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 RBP1P09455 135 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 FBXO45P0C2W1 286 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 SERPINB3P29508 390 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 MAN2A2P49641 1150 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 KCNJ2P63252 427 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 EBPQ15125 230 aaKnown RBP14.94□□□□□ -0.02
SNX1-213ENST00000561026 NUDT13Q86X67 352 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 FBXW8Q8N3Y1 598 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 PTGR2Q8N8N7 351 aaPredicted RBP14.94□□□□□ -0.02
SNX1-213ENST00000561026 OR52B6Q8NGF0 335 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 ATP6V1E2Q96A05 226 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 SARAFQ96BY9 339 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 PHF21BQ96EK2 531 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 SERPINI1Q99574 410 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 LDAHQ9H6V9 325 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 PROK2Q9HC23 129 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 ZFP64Q9NPA5 681 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 ZNF358Q9NW07 568 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 CNIH4Q9P003 139 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 ACAD8Q9UKU7 415 aa14.94□□□□□ -0.02
SNX1-213ENST00000561026 INTS1Q8N201 2190 aaKnown RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 TRGV5A0A0B4J1U4 118 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 PGRMC2O15173 223 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 CLPSP04118 112 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 RFPL3SP0C7P2 107 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 GLI4P10075 376 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 MSX1P28360 303 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 MAGEA12P43365 314 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 PRAMEF20Q5VT98 475 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 FRG2Q64ET8 278 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 RTL6Q6ICC9 239 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 B3GNT6Q6ZMB0 384 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 LRRC25Q8N386 305 aaPredicted RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 FAM13CQ8NE31 585 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 OR10G3Q8NGC4 313 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 OR10Q1Q8NGQ4 319 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 SLC44A1Q8WWI5 657 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 ISL2Q96A47 359 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 FRG2BQ96QU4 278 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 NTMT1Q9BV86 223 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 ZNF703Q9H7S9 590 aaPredicted RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 CXorf21Q9HAI6 301 aa14.93□□□□□ -0.02
SNX1-213ENST00000561026 MTRF1LQ9UGC7 380 aaKnown RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 BOKQ9UMX3 212 aaPredicted RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 PHF3Q92576 2039 aaKnown RBP14.93□□□□□ -0.02
SNX1-213ENST00000561026 FOXO6A8MYZ6 492 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 STX16-NPEPL1H3BU86 382 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 STX16O14662 325 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 WDR1O75083 606 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms