RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TMIGD3P0DMS9 266 aaPredicted RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 DOC2AQ14183 400 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 RCAN2Q14206 197 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 POU4F3Q15319 338 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 TGFBIQ15582 683 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 HIST2H2ACQ16777 129 aaPredicted RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 SPRED3Q2MJR0 410 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 AP5B1Q2VPB7 878 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 C18orf21Q32NC0 220 aaPredicted RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 PAGE2BQ5JRK9 111 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 PRAMEF9Q5VWM5 478 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 HIST2H2AA3Q6FI13 130 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 PACS2Q86VP3 889 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 ST13P4Q8IZP2 240 aaPredicted RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 ABTB1Q969K4 478 aaPredicted RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 TP53INP1Q96A56 240 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 PPWD1Q96BP3 646 aaKnown RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 Q96MF0 132 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 UCN2Q96RP3 112 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 UGT2B28Q9BY64 529 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 RPF2Q9H7B2 306 aaKnown RBP16.95■□□□□ 0.3
TPM1-226ENST00000560959 HRKO00198 91 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 CDH16O75309 829 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 RCBTB2O95199 551 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 ACTL6AO96019 429 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 CPN1P15169 458 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 ALOX15P16050 662 aaPredicted RBP16.94■□□□□ 0.3
TPM1-226ENST00000560959 FPR1P21462 350 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 GALNSP34059 522 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 CASP2P42575 452 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 SLC37A1P57057 533 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 E2F2Q14209 437 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 EBPQ15125 230 aaKnown RBP16.94■□□□□ 0.3
TPM1-226ENST00000560959 RPS6KA2Q15349 733 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 TSNQ15631 228 aaKnown RBP16.94■□□□□ 0.3
TPM1-226ENST00000560959 TBCCQ15814 346 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 FNDC7Q5VTL7 733 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 ADNP2Q6IQ32 1131 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 DGAT2L6Q6ZPD8 337 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 OR4N5Q8IXE1 308 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 C9orf106Q8NAJ2 232 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 SPPL2AQ8TCT8 520 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 GRK7Q8WTQ7 553 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 VPS39Q96JC1 886 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 GNRHR2Q96P88 292 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 MS4A8Q9BY19 250 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 PIGMQ9H3S5 423 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 PLAC1Q9HBJ0 212 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 GALNT8Q9NY28 637 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 SLC17A6Q9P2U8 582 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 C15orf41Q9Y2V0 281 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 SLC6A5Q9Y345 797 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 NCKAP5O14513 1909 aa16.94■□□□□ 0.3
TPM1-226ENST00000560959 NINQ8N4C6 2090 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 TAPBPO15533 448 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 CD22P20273 847 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 TLX1P31314 330 aaPredicted RBP16.93■□□□□ 0.3
TPM1-226ENST00000560959 RPP38P78345 283 aaKnown RBP16.93■□□□□ 0.3
TPM1-226ENST00000560959 FRG1Q14331 258 aaKnown RBP16.93■□□□□ 0.3
TPM1-226ENST00000560959 MSS51Q4VC12 460 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 SCIMPQ6UWF3 145 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 RNF111Q6ZNA4 994 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 ADGRE4PQ86SQ3 457 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 IGDCC3Q8IVU1 814 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 ZNF441Q8N8Z8 693 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 ZNF473Q8WTR7 871 aaKnown RBP16.93■□□□□ 0.3
TPM1-226ENST00000560959 UBE2E3Q969T4 207 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 TMEM41AQ96HV5 264 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 RILPQ96NA2 401 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 GAL3ST4Q96RP7 486 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 TM9SF2Q99805 663 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 PHACTR1Q9C0D0 580 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 POPDC3Q9HBV1 291 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 SNX15Q9NRS6 342 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 RTTNQ86VV8 2226 aa16.93■□□□□ 0.3
TPM1-226ENST00000560959 A8MXE2 369 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 STK16O75716 305 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 CYP4B1P13584 511 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 SERPINB1P30740 379 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 TMED10P49755 219 aaKnown RBP16.92■□□□□ 0.3
TPM1-226ENST00000560959 ILF2Q12905 390 aaKnown RBP16.92■□□□□ 0.3
TPM1-226ENST00000560959 GAB1Q13480 694 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 SULT1C3Q6IMI6 304 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 YTHDF3Q7Z739 585 aaKnown RBP16.92■□□□□ 0.3
TPM1-226ENST00000560959 ZC3HC1Q86WB0 502 aaKnown RBP16.92■□□□□ 0.3
TPM1-226ENST00000560959 ANKRD49Q8WVL7 239 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 KRT12Q99456 494 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 NAP1L3Q99457 506 aaPredicted RBP16.92■□□□□ 0.3
TPM1-226ENST00000560959 TMEM79Q9BSE2 394 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 PHF11Q9UIL8 331 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 ADAM21Q9UKJ8 722 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 TESMINQ9Y4I5 508 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 NPFFR2Q9Y5X5 522 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 ATRQ13535 2644 aa16.92■□□□□ 0.3
TPM1-226ENST00000560959 ARID1AO14497 2285 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 C2orf92A0A1B0GVN3 265 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 RTCAO00442 366 aaKnown RBP16.91■□□□□ 0.3
TPM1-226ENST00000560959 LRATO95237 230 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms