RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ITPR1Q14643 2758 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 SCN2AQ99250 2005 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 OR2W5A6NFC9 320 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 CFAP73A6NFT4 308 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 CAPN14A8MX76 684 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 PIP5K1BO14986 540 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 LDB3O75112 727 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 SEC22BO75396 215 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 GBAP04062 536 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 ASMTP46597 345 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 RAE1P78406 368 aaKnown RBP13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 Q0VFX4 171 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 MFAP5Q13361 173 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 LY6DQ14210 128 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 ATP6AP1LQ52LC2 224 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 C6orf163Q5TEZ5 329 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 NOXRED1Q6NXP6 359 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 FAM9CQ8IZT9 166 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 SHISA5Q8N114 240 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 NFAM1Q8NET5 270 aaPredicted RBP13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC7A6OSQ96CW6 309 aaPredicted RBP13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 ZNF354BQ96LW1 612 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 CCDC106Q9BWC9 280 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 SEMA4CQ9C0C4 833 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 TUBB1Q9H4B7 451 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 PNO1Q9NRX1 252 aaKnown RBP13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 GIMAP4Q9NUV9 329 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 ARL8BQ9NVJ2 186 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 COPS7AQ9UBW8 275 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 ANAPC2Q9UJX6 822 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 MAPRE3Q9UPY8 281 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 TP53TG5Q9Y2B4 290 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 FIS1Q9Y3D6 152 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 ZNF780BQ9Y6R6 833 aa13.06□□□□□ -0.32
PKNOX1-209ENST00000560448 IGHV3-20A0A0C4DH32 117 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 A6NL46 340 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 CCDC22O60826 627 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 SLITRK5O94991 958 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 CBX6O95503 412 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 ATP1B1P05026 303 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 LINC00032P0C843 101 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TNNI3P19429 210 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 CSNK2A2P19784 350 aaPredicted RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 DDCP20711 480 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 SOX11P35716 441 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 RPL3P39023 403 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 KLRB1Q12918 225 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 MEP1AQ16819 746 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 SOWAHCQ53LP3 525 aaPredicted RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 ABHD17BQ5VST6 288 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 SCIMPQ6UWF3 145 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 APCDD1LQ8NCL9 501 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 OR1N1Q8NGS0 311 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 BRIX1Q8TDN6 353 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 C16orf78Q8WTQ4 265 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 PSMF1Q92530 271 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 LRMDAQ9H2I8 198 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TAS2R7Q9NYW3 318 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TRIM33Q9UPN9 1127 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 DLGAP4Q9Y2H0 992 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 DYTNA2CJ06 578 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 C17orf105B2RV13 164 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TMEM233B4DJY2 109 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TGFBR3LH3BV60 316 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 HDAC3O15379 428 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 OR10H2O60403 315 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 HNRNPCL1O60812 293 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 ITGAMP11215 1152 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 PRPS2P11908 318 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 CPMP14384 443 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 PORP16435 677 aaPredicted RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 BTKQ06187 659 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 CEBPEQ15744 281 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC9B1Q4ZJI4 515 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TREML1Q86YW5 311 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 NATD1Q8N6N6 113 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 TEX19Q8NA77 164 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 OR5L2Q8NGL0 311 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 AGR3Q8TD06 166 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 PTPMT1Q8WUK0 201 aaPredicted RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 RIT1Q92963 219 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 MTERF3Q96E29 417 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 FBXL20Q96IG2 436 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 NSL1Q96IY1 281 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 RILPQ96NA2 401 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 MESP1Q9BRJ9 268 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 RALYQ9UKM9 306 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 UTS2RQ9UKP6 389 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
PKNOX1-209ENST00000560448 ATMQ13315 3056 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 OR6C76A6NM76 312 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 PGRMC2O15173 223 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 TBX19O60806 448 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 ZFAND5O76080 213 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 IL3P08700 152 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms