RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ASPHQ12797 758 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 ERCC6LQ2NKX8 1250 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 FAM180BQ6P0A1 224 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 PAGE2Q7Z2X7 111 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 OR8K3Q8NH51 312 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CHTF18Q8WVB6 975 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 ASB15Q8WXK1 588 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 RIT1Q92963 219 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 TMEM125Q96AQ2 219 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 SHCBP1LQ9BZQ2 653 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CXorf21Q9HAI6 301 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 MID1IP1Q9NPA3 183 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 VPS29Q9UBQ0 182 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CES1P1Q9UKY3 287 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 NPIPA1Q9UND3 350 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 ERVK-11Q9UQG0 969 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 PCDHA9Q9Y5H5 950 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 A8MVJ9 347 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 ESPNB1AK53 854 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 PEX1O43933 1283 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 ULK1O75385 1050 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 NADKO95544 446 aaPredicted RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 ENO1P06733 434 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CT62P0C5K7 136 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 PIK3R1P27986 724 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 SSTR4P31391 388 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 XKP51811 444 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 NR0B1P51843 470 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC37A1P57057 533 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 DNAJB13P59910 316 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 HSF1Q00613 529 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 DUSP2Q05923 314 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CSTF3Q12996 717 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 BIKQ13323 160 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 SPRED3Q2MJR0 410 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CCDC153Q494R4 210 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 C4orf17Q53FE4 359 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 WDR93Q6P2C0 686 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 FRMD7Q6ZUT3 714 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 TRABD2AQ86V40 505 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 FJX1Q86VR8 437 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 C10orf107Q8IVU9 208 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CHERPQ8IWX8 916 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CCDC63Q8NA47 563 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 PSD4Q8NDX1 1056 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 OR4K14Q8NGD5 310 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 OR5L2Q8NGL0 311 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CCDC126Q96EE4 140 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 APIPQ96GX9 242 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 GPR137Q96N19 417 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 GAL3ST4Q96RP7 486 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 OXSMQ9NWU1 459 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 HPF1Q9NWY4 346 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 HEY2Q9UBP5 337 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 PLEKHB1Q9UF11 243 aaPredicted RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 KLF13Q9Y2Y9 288 aaPredicted RBP10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 CELSR2Q9HCU4 2923 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 DNAJC13O75165 2243 aa10.78□□□□□ -0.68
RABGGTA-216ENST00000560243 NOTCH2Q04721 2471 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 ITPR2Q14571 2701 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 ASNA1O43681 348 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 DYRK3O43781 588 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 ZG16O60844 167 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 SPAG7O75391 227 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 CLDN1O95832 211 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 GP1BBP13224 206 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 HSD3B1P14060 373 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 CPMP14384 443 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 CREB1P16220 341 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF24P17028 368 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 HSD3B2P26439 372 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 SOX18P35713 384 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 FEN1P39748 380 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 ALDH9A1P49189 494 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 BTKQ06187 659 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 PCLAFQ15004 111 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 EBPQ15125 230 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 MPEG1Q2M385 716 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 PIGGQ5H8A4 983 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 SLC48A1Q6P1K1 146 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 EMBQ6PCB8 327 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 LYPD8Q6UX82 237 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 TMEM64Q6YI46 380 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 RNF111Q6ZNA4 994 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 FGD2Q7Z6J4 655 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 SRRM1Q8IYB3 904 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 CNPY4Q8N129 248 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 BANPQ8N9N5 519 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 FAM98AQ8NCA5 519 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 SIMC1Q8NDZ2 872 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 NUBPLQ8TB37 319 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 RDH11Q8TC12 318 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 ZBTB9Q96C00 473 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 C11orf24Q96F05 449 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 PELOQ9BRX2 385 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 PARD6BQ9BYG5 372 aa10.77□□□□□ -0.69
RABGGTA-216ENST00000560243 WWTR1Q9GZV5 400 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms