RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 MAT1AQ00266 395 aaKnown RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 MRPL49Q13405 166 aaKnown RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 NAE1Q13564 534 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 SFT2D3Q587I9 215 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 AGAP7PQ5VUJ5 663 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 C8orf82Q6P1X6 216 aaPredicted RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 LRRC70Q7Z2Q7 622 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 ZC3H7AQ8IWR0 971 aaKnown RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 TCAIMQ8N3R3 496 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 ZADH2Q8N4Q0 377 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 PSMF1Q92530 271 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 TM9SF4Q92544 642 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 PPWD1Q96BP3 646 aaKnown RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 AGAP4Q96P64 663 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 OR4K3Q96R72 315 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 SEMA6AQ9H2E6 1030 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 LRTM1Q9HBL6 345 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 ZNF160Q9HCG1 818 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 ASF1BQ9NVP2 202 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 CMTM6Q9NX76 183 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 C6orf203Q9P0P8 240 aaPredicted RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 TRPS1Q9UHF7 1281 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 AURKCQ9UQB9 309 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 NTNG1Q9Y2I2 539 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 AP4S1Q9Y587 144 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
IDH3A-217ENST00000559889 SPTAN1Q13813 2472 aaKnown RBP8.57□□□□□ -1.04
IDH3A-217ENST00000559889 FEZF1A0PJY2 475 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ASPDHA6ND91 283 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 RSL1D1O76021 490 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 PDYNP01213 254 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ZFP36L2P47974 494 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 EMP2P54851 167 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 AP1S2P56377 157 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 RPS15AP62244 130 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 C6orf10Q5SRN2 563 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 TMEM214Q6NUQ4 689 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 SPPL2CQ8IUH8 684 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 LIX1Q8N485 282 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ICA1LQ8NDH6 482 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 OR9A4Q8NGU2 314 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 THOC3Q96J01 351 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 PKP2Q99959 881 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 GPATCH1Q9BRR8 931 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 PCBD2Q9H0N5 130 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 MKKSQ9NPJ1 570 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 SLC52A3Q9NQ40 469 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 DNAJC11Q9NVH1 559 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 C14orf105Q9NVL8 296 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 CCL27Q9Y4X3 112 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 LOC102723996A0A087X1L8 192 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 IGHV1-45A0A0A0MS14 117 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 SEMA7AO75326 666 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 EEDO75530 441 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 JRKO75564 520 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 KLHL18O94889 574 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 BMP10O95393 424 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 RNF224P0DH78 156 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 CDKL1Q00532 357 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 IRF8Q02556 426 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 TRAP1Q12931 704 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 CHIT1Q13231 466 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 MAD2L1Q13257 205 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 DDX39BQ13838 428 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 TLR1Q15399 786 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 EIF2S3LQ2VIR3 472 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 FAM174BQ3ZCQ3 159 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 CDKL4Q5MAI5 379 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 NANOGP8Q6NSW7 305 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 METTL2BQ6P1Q9 378 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 LCTLQ6UWM7 567 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 PDSS2Q86YH6 399 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 LILRA2Q8N149 483 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 RNF175Q8N4F7 328 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 KCT2Q8NC54 265 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ABHD11Q8NFV4 315 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 OR4K1Q8NGD4 311 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 OR56A3Q8NH54 315 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 TSPEARQ8WU66 669 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ZBTB18Q99592 522 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 WDR77Q9BQA1 342 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ACPTQ9BZG2 426 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 DPY30Q9C005 99 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 ALG2Q9H553 416 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 NANOGQ9H9S0 305 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 DTNAQ9Y4J8 743 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 SNX13Q9Y5W8 968 aa8.56□□□□□ -1.04
IDH3A-217ENST00000559889 MDC1Q14676 2089 aaKnown RBP8.56□□□□□ -1.04
IDH3A-217ENST00000559889 DOCK10Q96BY6 2186 aa8.55□□□□□ -1.04
IDH3A-217ENST00000559889 H0YIG0 161 aa8.55□□□□□ -1.04
IDH3A-217ENST00000559889 SH3BGRLO75368 114 aa8.55□□□□□ -1.04
IDH3A-217ENST00000559889 NSA2O95478 260 aaKnown RBP8.55□□□□□ -1.04
IDH3A-217ENST00000559889 UBTFL6P0CB48 400 aaPredicted RBP8.55□□□□□ -1.04
IDH3A-217ENST00000559889 CDH1P12830 882 aa8.55□□□□□ -1.04
IDH3A-217ENST00000559889 SLC6A12P48065 614 aa8.55□□□□□ -1.04
IDH3A-217ENST00000559889 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms