RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 EDEM2Q9BV94 578 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 NACA2Q9H009 215 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 GANQ9H2C0 597 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 WDR76Q9H967 626 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 YAE1D1Q9NRH1 226 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 AIPL1Q9NZN9 384 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 NARFQ9UHQ1 456 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 PSORS1C1Q9UIG5 152 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 DAPK2Q9UIK4 370 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 TNNQ9UQP3 1299 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 TMED7Q9Y3B3 224 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 LGALS8O00214 317 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 PDXKO00764 312 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CHUKO15111 745 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 OGTO15294 1046 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 ADAM12O43184 909 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 SYT7O43581 403 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 KIAA0754O94854 1291 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 NXPH2O95156 264 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 SYNGR4O95473 234 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GP1BBP13224 206 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CD59P13987 128 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 ANPEPP15144 967 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GNSP15586 552 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GATA1P15976 413 aaPredicted RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 GOT1P17174 413 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 ATP6V1C1P21283 382 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CA4P22748 312 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 PTPN6P29350 595 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 SFTPDP35247 375 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 NKX2-1P43699 371 aaPredicted RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 CSRP3P50461 194 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 ATP5IP56385 69 aaPredicted RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 KCNK10P57789 538 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 TNFRSF17Q02223 184 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GABPAQ06546 454 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CDH18Q13634 790 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 HLA-BQ31612 363 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 ADPRMQ3LIE5 342 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CFAP221Q4G0U5 840 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 KCTD21Q4G0X4 260 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 SPDYCQ5MJ68 293 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 HIST2H2AA3Q6FI13 130 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 METAP1DQ6UB28 335 aaPredicted RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 FIP1L1Q6UN15 594 aaKnown RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 PAQR9Q6ZVX9 377 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 YRDCQ86U90 279 aaKnown RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 LRRTM1Q86UE6 522 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CCDC60Q8IWA6 550 aaPredicted RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 RNF149Q8NC42 400 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 TRPV3Q8NET8 790 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 OR5AP2Q8NGF4 316 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 OR10Q1Q8NGQ4 319 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GOLGA5Q8TBA6 731 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GANCQ8TET4 914 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 GLYATL1Q969I3 302 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 PINX1Q96BK5 328 aaKnown RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 RAB39BQ96DA2 213 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 PIWIL1Q96J94 861 aaKnown RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 SENP8Q96LD8 212 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 CAPS2Q9BXY5 557 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 NFKBIZQ9BYH8 718 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 TLE6Q9H808 572 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 HPS4Q9NQG7 708 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 SDR39U1Q9NRG7 319 aaPredicted RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 DDX28Q9NUL7 540 aaKnown RBP3.17□□□□□ -1.9
SPG11-218ENST00000559754 SLC12A6Q9UHW9 1150 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 SF3B1O75533 1304 aaKnown RBP eCLIP3.17□□□□□ -1.9
SPG11-218ENST00000559754 TTC21BQ7Z4L5 1316 aa3.17□□□□□ -1.9
SPG11-218ENST00000559754 NPC1L1Q9UHC9 1359 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 A0A0U1RQS6 177 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 MSGN1A6NI15 193 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 LRRIQ4A6NIV6 560 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 A8MUI8 341 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 C2CD4DB7Z1M9 353 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 E9PBE3 544 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 ARPC1BO15143 372 aaKnown RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 ERLIN1O75477 346 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 OR4F21O95013 312 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 CPNE6O95741 557 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 EPOP01588 193 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 GSTA2P09210 222 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 CT45A8P0DMV1 189 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 CT45A9P0DMV2 189 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 F3P13726 295 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 GP9P14770 177 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 B4GALT1P15291 398 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 PAICSP22234 425 aaKnown RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 AXLP30530 894 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 SRD5A2P31213 254 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 PRDX2P32119 198 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 SLC1A3P43003 542 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 SH3BGRP55822 239 aaPredicted RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 HERV-K104P63124 156 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 TRAP1Q12931 704 aaKnown RBP3.16□□□□□ -1.9
SPG11-218ENST00000559754 PDK3Q15120 406 aa3.16□□□□□ -1.9
SPG11-218ENST00000559754 TATDN3Q17R31 274 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms