RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF717Q9BY31 904 aaPredicted RBP12.04□□□□□ -0.48
TPM1-220ENST00000559556 POLDIP3Q9BY77 421 aaKnown RBP12.04□□□□□ -0.48
TPM1-220ENST00000559556 WWTR1Q9GZV5 400 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 SLC6A15Q9H2J7 730 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 OR51B5Q9H339 312 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 ALG9Q9H6U8 611 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 DMRT3Q9NQL9 472 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 CCM2LQ9NUG4 571 aaPredicted RBP12.04□□□□□ -0.48
TPM1-220ENST00000559556 TRMT1Q9NXH9 659 aaKnown RBP12.04□□□□□ -0.48
TPM1-220ENST00000559556 OPTCQ9UBM4 332 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 ADGRE2Q9UHX3 823 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 CNOT11Q9UKZ1 510 aaKnown RBP12.04□□□□□ -0.48
TPM1-220ENST00000559556 ERVK-19Q9WJR5 959 aa12.04□□□□□ -0.48
TPM1-220ENST00000559556 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 OR6C76A6NM76 312 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 HSPB2A8KAH6 182 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 SAP18O00422 153 aaKnown RBP12.03□□□□□ -0.48
TPM1-220ENST00000559556 SYT5O00445 386 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 KERAO60938 352 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 PRKRAO75569 313 aaKnown RBP12.03□□□□□ -0.48
TPM1-220ENST00000559556 SERPINB3P29508 390 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 GMPRP36959 345 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 BUD31P41223 144 aaPredicted RBP12.03□□□□□ -0.48
TPM1-220ENST00000559556 KIR2DL3P43628 341 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 ASCL1P50553 236 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 RAP1GDS1P52306 607 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 SLC37A1P57057 533 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 DLG1Q12959 904 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 EBPQ15125 230 aaKnown RBP12.03□□□□□ -0.48
TPM1-220ENST00000559556 HSPB2Q16082 182 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 FLYWCH1Q4VC44 716 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 C18orf63Q68DL7 685 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 RNF111Q6ZNA4 994 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 RNF175Q8N4F7 328 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 HUS1BQ8NHY5 278 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 STAG3L4Q8TBR4 150 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 RMND5BQ96G75 393 aaPredicted RBP12.03□□□□□ -0.48
TPM1-220ENST00000559556 ZNF597Q96LX8 424 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 GAL3ST4Q96RP7 486 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
TPM1-220ENST00000559556 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 LIME1Q9H400 295 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 SAYSD1Q9NPB0 183 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 RASSF1Q9NS23 344 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 ALKBH4Q9NXW9 302 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 CRIM1Q9NZV1 1036 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 SNX24Q9Y343 169 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 SAR1BQ9Y6B6 198 aa12.03□□□□□ -0.48
TPM1-220ENST00000559556 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.48
TPM1-220ENST00000559556 ANKRD33BA6NCL7 494 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 SUPT3HB4E1H0 165 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 UBXN8O00124 270 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 DVL2O14641 736 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 PROM1O43490 865 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 TRIM3O75382 744 aaPredicted RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 SUPT3HO75486 399 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 GPR75O95800 540 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 CLPSP04118 112 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 GSTA2P09210 222 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 EPB42P16452 691 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 KLK2P20151 261 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 GDF1P27539 372 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 TLX1P31314 330 aaPredicted RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 CEACAM8P31997 349 aaPredicted RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 GALNSP34059 522 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 SPRP35270 261 aaPredicted RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 CRYZQ08257 329 aaKnown RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 DDX39BQ13838 428 aaKnown RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 RPS6KA2Q15349 733 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 CEBPEQ15744 281 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 TBCELQ5QJ74 424 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 MRM1Q6IN84 353 aaKnown RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 CMC1Q7Z7K0 106 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 LACC1Q8IV20 430 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 LIX1Q8N485 282 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 ZNF441Q8N8Z8 693 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 NAXEQ8NCW5 288 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 ALPK1Q96QP1 1244 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 MTERF1Q99551 399 aaKnown RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 DOHHQ9BU89 302 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 NMRAL1Q9HBL8 299 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 LYARQ9NX58 379 aaKnown RBP12.02□□□□□ -0.49
TPM1-220ENST00000559556 WHRNQ9P202 907 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 ASB4Q9Y574 426 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 IKBKGQ9Y6K9 419 aa12.02□□□□□ -0.49
TPM1-220ENST00000559556 COL6A5A8TX70 2615 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 A0A0A6YYD5 115 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 IQANK1A0A1B0GTG1 560 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 A6NNC1 897 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 AHRRA9YTQ3 701 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 KDM4EB2RXH2 506 aaPredicted RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 OR10H2O60403 315 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 LRATO95237 230 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 EPPINO95925 133 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 LTA4HP09960 611 aaKnown RBP12.01□□□□□ -0.49
TPM1-220ENST00000559556 NR2F6P10588 404 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 MTHFD2P13995 350 aa12.01□□□□□ -0.49
TPM1-220ENST00000559556 BMP5P22003 454 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms