RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 VMP1Q96GC9 406 aa18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 SENP5Q96HI0 755 aaPredicted RBP18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 TSSK3Q96PN8 268 aa18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 OR8D2Q9GZM6 311 aa18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 AKTIPQ9H8T0 292 aa18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 EHD3Q9NZN3 535 aa18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 MARCOQ9UEW3 520 aaPredicted RBP18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 UTS2RQ9UKP6 389 aa18.9■□□□□ 0.62
TSPAN3-207ENST00000559494 CFAP46Q8IYW2 2715 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 TRBV11-1A0A0K0K1C0 115 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 PRKNO60260 465 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 MAN1A2O60476 641 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CSNK2A2P19784 350 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 DDCP20711 480 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CD97P48960 835 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CLCN2P51788 898 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 NFATC3Q12968 1075 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 MFAP5Q13361 173 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF267Q14586 743 aaPredicted RBP18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 IL23RQ5VWK5 629 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CRLF3Q8IUI8 442 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 RBMXL3Q8N7X1 1067 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 DYDC1Q8WWB3 177 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CKAP2Q8WWK9 683 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 RIT1Q92963 219 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 GFM2Q969S9 779 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 EXOSC8Q96B26 276 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CDCP1Q9H5V8 836 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 MEAF6Q9HAF1 191 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 CXorf21Q9HAI6 301 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 SLCO1B3Q9NPD5 702 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 SLC35C2Q9NQQ7 365 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 TAS2R7Q9NYW3 318 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 STMN3Q9NZ72 180 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF780BQ9Y6R6 833 aa18.89■□□□□ 0.61
TSPAN3-207ENST00000559494 HDAC3O15379 428 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 C1QL1O75973 258 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 IGKV3-11P04433 115 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 CT62P0C5K7 136 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 SPRED3Q2MJR0 410 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 ACER2Q5QJU3 275 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 IKBIPQ70UQ0 350 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 RPS19BP1Q86WX3 136 aaKnown RBP18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 TICAM1Q8IUC6 712 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 FNDC5Q8NAU1 212 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 CLHC1Q8NHS4 586 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF354BQ96LW1 612 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 C1orf50Q9BV19 199 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 DEFB126Q9BYW3 111 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 PLA2G3Q9NZ20 509 aa18.88■□□□□ 0.61
TSPAN3-207ENST00000559494 CPAMD8Q8IZJ3 1885 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 TMEM200CA6NKL6 621 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 SDHDO14521 159 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 AKAP10O43572 662 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 DPM1O60762 260 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 NT5EP21589 574 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 MAPK1P28482 360 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 PTGER1P34995 402 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 SOX18P35713 384 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 ST13P50502 369 aaKnown RBP18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 ERVK-8P63133 956 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 EMX2Q04743 252 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 MGAT2Q10469 447 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 SMU1Q2TAY7 513 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 ABHD17BQ5VST6 288 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 HPS6Q86YV9 775 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 CCDC116Q8IYX3 515 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF843Q8N446 348 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 LIX1Q8N485 282 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 SLC5A8Q8N695 610 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 THAP3Q8WTV1 239 aaPredicted RBP18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 FBXL20Q96IG2 436 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 C7orf26Q96N11 449 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 CNPPD1Q9BV87 410 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 MFRPQ9BY79 579 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 EPS8L2Q9H6S3 715 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 ERVK-19Q9WJR5 959 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 CSAG2Q9Y5P2 127 aa18.87■□□□□ 0.61
TSPAN3-207ENST00000559494 SLCO1B7G3V0H7 640 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF195O14628 629 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 DYRK3O43781 588 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 ZFAND5O76080 213 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 LRATO95237 230 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 WDPCPO95876 746 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 ATP1B1P05026 303 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 PRPS2P11908 318 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 S1PR1P21453 382 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 MLF1P58340 268 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 KLRB1Q12918 225 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 CEBPEQ15744 281 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 MEP1AQ16819 746 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 PRICKLE4Q2TBC4 344 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 NADK2Q4G0N4 442 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 HSP90B2PQ58FF3 399 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 COLEC12Q5KU26 742 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 FAM111BQ6SJ93 734 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 HSDL2Q6YN16 418 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 LARP4Q71RC2 724 aaKnown RBP eCLIP18.86■□□□□ 0.617e-7■□□□□ 8.8
TSPAN3-207ENST00000559494 MAVSQ7Z434 540 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 ARMC10Q8N2F6 343 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms