RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KAT8Q9H7Z6 458 aaKnown RBP2.02□□□□□ -2.09
GABPB1-209ENST00000559100 RMND5AQ9H871 391 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 COG4Q9H9E3 785 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 PLEKHA3Q9HB20 300 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 SLC25A19Q9HC21 320 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF334Q9HCZ1 680 aaPredicted RBP2.02□□□□□ -2.09
GABPB1-209ENST00000559100 MAN2C1Q9NTJ4 1040 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 ATAD3AQ9NVI7 634 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 NLGN3Q9NZ94 848 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 COX16Q9P0S2 106 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 P2RX2Q9UBL9 471 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 EIF3KQ9UBQ5 218 aaKnown RBP2.02□□□□□ -2.09
GABPB1-209ENST00000559100 LHX3Q9UBR4 397 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 LNPEPQ9UIQ6 1025 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 PPP1R3CQ9UQK1 317 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 MRPS7Q9Y2R9 242 aaKnown RBP2.02□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF175Q9Y473 711 aa2.02□□□□□ -2.09
GABPB1-209ENST00000559100 DDX49Q9Y6V7 483 aaKnown RBP2.02□□□□□ -2.09
GABPB1-209ENST00000559100 MYH14Q7Z406 1995 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 NEDD4P46934 1319 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 AFF2P51816 1311 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 KIF16BQ96L93 1317 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 IGHV4-4A0A075B6R2 117 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 C15orf38-AP3S2A0A0A6YYH1 394 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 A0A1W2PR80 420 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 FAM172BPA6NC97 362 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 OR5H15A6NDH6 313 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GLTPD2A6NH11 291 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ANHXE9PGG2 379 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 NEDD8-MDP1E9PL57 170 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 K7EQM0 130 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 K7ERI5 159 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 INPP4BO15327 924 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 LMX1BO60663 402 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 DUSP11O75319 330 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 OR4F21O95013 312 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 NXPH2O95156 264 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 KRT8P05787 483 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 F7P08709 466 aaPredicted RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GP9P14770 177 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 PAX1P15863 534 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GLRA1P23415 457 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GLRA2P23416 452 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 IL4RP24394 825 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CALML3P27482 149 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 DPP4P27487 766 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CHRNB4P30926 498 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 RPL9P32969 192 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ADRA1AP35348 466 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CHI3L1P36222 383 aaPredicted RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 SLC1A6P48664 564 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 THBS3P49746 956 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 FHITP49789 147 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 NANOS2P60321 138 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 HERVK_113P63132 956 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ERVK-8P63133 956 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 DHODHQ02127 395 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GUCY2DQ02846 1103 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ARL16Q0P5N6 197 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 FUT7Q11130 342 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 BNIP1Q12981 228 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 RIPK1Q13546 671 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 EXOSC2Q13868 293 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 EFTUD2Q15029 972 aaKnown RBP eCLIP2.01□□□□□ -2.091e-5■□□□□ 9
GABPB1-209ENST00000559100 RBBP5Q15291 538 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ZMYND11Q15326 602 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 TAB1Q15750 504 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 FAM189A2Q15884 450 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 PDK4Q16654 411 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ECSCRQ19T08 205 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF718Q3SXZ3 478 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 POM121L1PQ3SYA9 428 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CEP55Q53EZ4 464 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF311Q5JNZ3 666 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 NCR3LG1Q68D85 454 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CENPPQ6IPU0 288 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 LRRC8BQ6P9F7 803 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CES3Q6UWW8 571 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 DPY19L2P2Q6ZN68 376 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 Q7L0L9 218 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 C1QL2Q7Z5L3 287 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 VPS36Q86VN1 386 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 EFCAB13Q8IY85 973 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CIARTQ8N365 385 aaPredicted RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 KLHDC9Q8NEP7 349 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 OR5M9Q8NGP3 310 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 FBXO25Q8TCJ0 367 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 PNPT1Q8TCS8 783 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CD99L2Q8TCZ2 262 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ZNRF4Q8WWF5 429 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 LIPHQ8WWY8 451 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 CTNNBL1Q8WYA6 563 aaPredicted RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 PRAC1Q96KF2 57 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 LURAP1Q96LR2 239 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 TSPAN18Q96SJ8 248 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF607Q96SK3 696 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 GPA33Q99795 319 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 DCTN5Q9BTE1 182 aa2.01□□□□□ -2.09
GABPB1-209ENST00000559100 WRAP53Q9BUR4 548 aaKnown RBP2.01□□□□□ -2.09
GABPB1-209ENST00000559100 ERVK-6Q9BXR3 956 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms