RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CTSBP07858 339 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 ADARB1P78563 741 aaKnown RBP12.21□□□□□ -0.46
SMAD3-207ENST00000558763 RUNX2Q13950 521 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF630Q2M218 657 aaPredicted RBP12.21□□□□□ -0.46
SMAD3-207ENST00000558763 CRB2Q5IJ48 1285 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 OTUD3Q5T2D3 398 aaPredicted RBP12.21□□□□□ -0.46
SMAD3-207ENST00000558763 OGFOD3Q6PK18 319 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 CEACAM20Q6UY09 585 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 PRR23CQ6ZRP0 262 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 USP51Q70EK9 711 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 PRSS41Q7RTY9 318 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 OR4C6Q8NH72 309 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 CSF3RQ99062 836 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.46
SMAD3-207ENST00000558763 EDEM2Q9BV94 578 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 DUSP23Q9BVJ7 150 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 OSBPL10Q9BXB5 764 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 SOX17Q9H6I2 414 aaPredicted RBP12.21□□□□□ -0.46
SMAD3-207ENST00000558763 UCK1Q9HA47 277 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 PARD6AQ9NPB6 346 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 USE1Q9NZ43 259 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 SCOCQ9UIL1 159 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 HCN4Q9Y3Q4 1203 aa12.21□□□□□ -0.46
SMAD3-207ENST00000558763 EP300Q09472 2414 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-207ENST00000558763 hCG_2039718K7EN88 272 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 SIGLEC6O43699 453 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 PCDHGA12O60330 932 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 HPRP00739 348 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 CAPZBP47756 277 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 CCT3P49368 545 aaKnown RBP12.2□□□□□ -0.46
SMAD3-207ENST00000558763 NCBP2P52298 156 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMAD3-207ENST00000558763 TNFRSF17Q02223 184 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 TGM3Q08188 693 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 COL9A2Q14055 689 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-207ENST00000558763 ELOAQ14241 798 aaKnown RBP12.2□□□□□ -0.46
SMAD3-207ENST00000558763 DEFB134Q4QY38 66 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 TNFAIP8L2Q6P589 184 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-207ENST00000558763 TMEM64Q6YI46 380 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 STK32CQ86UX6 486 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 SVOPLQ8N434 492 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 CAMKVQ8NCB2 501 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 SLC38A5Q8WUX1 472 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 FBXL20Q96IG2 436 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 SERINC2Q96SA4 455 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF696Q9H7X3 374 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 A4GALTQ9NPC4 353 aa12.2□□□□□ -0.46
SMAD3-207ENST00000558763 LILRA5A6NI73 299 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 G3V2T6 193 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 GUCY1B2O75343 617 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 ERAL1O75616 437 aaKnown RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 DIRAS1O95057 198 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 C9P02748 559 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 FABP3P05413 133 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 TFPTP0C1Z6 253 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 C8orf89P0DMQ9 161 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 NR2F6P10588 404 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 MYF6P23409 242 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SOX18P35713 384 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 PPM1FP49593 454 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 LIM2P55344 173 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 ITGA1P56199 1179 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SELENOWP63302 87 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 GPR19Q15760 415 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 OR2T5Q6IEZ7 315 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 ZDHHC13Q8IUH4 622 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 OR2T29Q8NH02 315 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 OR5K1Q8NHB7 308 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 APOBEC4Q8WW27 367 aaKnown RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 DOHHQ9BU89 302 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 GABARAPL1Q9H0R8 117 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SEMA6CQ9H3T2 930 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SMURF2Q9HAU4 748 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 LRIT1Q9P2V4 623 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 DAPP1Q9UN19 280 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 PADI2Q9Y2J8 665 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 RNF215Q9Y6U7 377 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF292O60281 2723 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 RHPN2P1A8MT19 583 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 M0QX08 132 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 CDX4O14627 284 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SUV39H1O43463 412 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 DPM1O60762 260 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 UBXN7O94888 489 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 CLIC3O95833 236 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 ALOX12P18054 663 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 NTSP30990 170 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 FEN1P39748 380 aaKnown RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 PRIM2P49643 509 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 TP53BP2Q13625 1128 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 CSRP2Q16527 193 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SHQ1Q6PI26 577 aaKnown RBP12.19□□□□□ -0.46
SMAD3-207ENST00000558763 CCDC116Q8IYX3 515 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 AVL9Q8NBF6 648 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 RAB8BQ92930 207 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 TPD52L3Q96J77 140 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 SLC38A3Q99624 504 aa12.19□□□□□ -0.46
SMAD3-207ENST00000558763 DNAAF2Q9NVR5 837 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms