RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OR5H15A6NDH6 313 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 GABRR3A8MPY1 467 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 LSM1O15116 133 aaKnown RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 PRKNO60260 465 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 SASH3O75995 380 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ZFAND5O76080 213 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 CPMP14384 443 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 PORP16435 677 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 NT5EP21589 574 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 GALNSP34059 522 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 FEN1P39748 380 aaKnown RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ST13P50502 369 aaKnown RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 MLF1P58340 268 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ERVK-8P63133 956 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 C2orf80Q0P641 193 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 BST1Q10588 318 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF267Q14586 743 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 TLR1Q15399 786 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 SPRED3Q2MJR0 410 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 PLEKHN1Q494U1 663 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 XKR7Q5GH72 579 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 C6orf163Q5TEZ5 329 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 FAM180BQ6P0A1 224 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 HSDL2Q6YN16 418 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 TRIM42Q8IWZ5 723 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 LGI4Q8N135 537 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 Q8NA96 180 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF721Q8TF20 911 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 HAS2Q92819 552 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 SENP5Q96HI0 755 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 PPP3R2Q96LZ3 170 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 RNF32Q9H0A6 362 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 EPN3Q9H201 632 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 MYNNQ9NPC7 610 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 PFDN4Q9NQP4 134 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ERVK-19Q9WJR5 959 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-205ENST00000558428 TMED5Q9Y3A6 229 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF780BQ9Y6R6 833 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 SVILO95425 2214 aa11.5□□□□□ -0.57
SMAD3-205ENST00000558428 UQCRHLA0A096LP55 91 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ATP6AP2A0A1C7CYW4 349 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 TTLL8A6PVC2 850 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 HRKO00198 91 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 FCHO1O14526 889 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 PEX11AO75192 247 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ATP6AP2O75787 350 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 SORBS2O94875 1100 aaKnown RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 TNFSF10P50591 281 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 RPL14P50914 215 aaKnown RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF169Q14929 603 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 PDCD2Q16342 344 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ATP6AP1LQ52LC2 224 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 RFTN2Q52LD8 501 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 FAM71E1Q6IPT2 247 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 GALNT12Q8IXK2 581 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 KIRREL3Q8IZU9 778 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 RAB3IL1Q8TBN0 382 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 EXOSC8Q96B26 276 aaKnown RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 C19orf60Q96EN9 201 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 CNRIP1Q96F85 164 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 FBXL20Q96IG2 436 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 FCRL1Q96LA6 429 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 C3orf30Q96M34 536 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 CCT7Q99832 543 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 UTP23Q9BRU9 249 aaKnown RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ACBD3Q9H3P7 528 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 LIN28AQ9H9Z2 209 aaKnown RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 CXorf21Q9HAI6 301 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 MIEF1Q9NQG6 463 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 GIMAP4Q9NUV9 329 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ANKRD10Q9NXR5 420 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 EHD3Q9NZN3 535 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 GIMAP2Q9UG22 337 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 HAO1Q9UJM8 370 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 ENTPD4Q9Y227 616 aa11.49□□□□□ -0.57
SMAD3-205ENST00000558428 WBP11Q9Y2W2 641 aaKnown RBP11.49□□□□□ -0.57
SMAD3-205ENST00000558428 FASNP49327 2511 aaKnown RBP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TRAV17A0A0B4J275 112 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 ITGA10O75578 1167 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 IGKV3-11P04433 115 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 JUNP05412 331 aaKnown RBP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 CT62P0C5K7 136 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 SDC1P18827 310 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 DDCP20711 480 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TACR1P25103 407 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 MAPK1P28482 360 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 MLLT10P55197 1068 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 RNF4P78317 190 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 OC90Q02509 493 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TLE1Q04724 770 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 DUSP2Q05923 314 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TUBA3CQ13748 450 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TUBA3EQ6PEY2 450 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms