RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ZNF407Q9C0G0 2248 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 NKX2-6A6NCS4 301 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 KLK8O60259 260 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 RBP1P09455 135 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 SLC35E2P0CK97 266 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 GLI4P10075 376 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 NR2F6P10588 404 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 IGFBP2P18065 325 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 PIK3R1P27986 724 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 MSX1P28360 303 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 GMPRP36959 345 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 PIGAP37287 484 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 SERPINB8P50452 374 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 HERVK_113P63132 956 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 ERVK-8P63133 956 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 CKAP4Q07065 602 aaKnown RBP12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 SF3B4Q15427 424 aaKnown RBP eCLIP12.55□□□□□ -0.43e-9■■■■□ 24.3
SNRPA1-204ENST00000558020 SPRED3Q2MJR0 410 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 TBCELQ5QJ74 424 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 C6orf163Q5TEZ5 329 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 ZDHHC24Q6UX98 284 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 C9orf40Q8IXQ3 194 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 DMRTC2Q8IXT2 367 aaPredicted RBP12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 FBXW8Q8N3Y1 598 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 LIX1Q8N485 282 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 L3MBTL4Q8NA19 623 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 TP53INP1Q96A56 240 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 GAL3ST4Q96RP7 486 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 ERVK-6Q9BXR3 956 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 CPSF2Q9P2I0 782 aaKnown RBP12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 MTRF1LQ9UGC7 380 aaKnown RBP12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 ERVK-19Q9WJR5 959 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 ASB4Q9Y574 426 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 PCDHGB3Q9Y5G1 929 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 DNAJC13O75165 2243 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 CCDC168Q8NDH2 2452 aa12.55□□□□□ -0.4
SNRPA1-204ENST00000558020 PHF3Q92576 2039 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 ANKRD17O75179 2603 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A1W2PR48 441 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 ANKRD33BA6NCL7 494 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 GLOD5A6NK44 160 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 ZNF354AO60765 605 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 GUCY1B2O75343 617 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 SEMA3DO95025 777 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 BSGP35613 385 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 TMED10P49755 219 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 CCNG1P51959 295 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 HNRNPH2P55795 449 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 NRG3P56975 720 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 SLC37A1P57057 533 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 RPP38P78345 283 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 IRF9Q00978 393 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 TFF3Q07654 80 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 MYBPHQ13203 477 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 TRADDQ15628 312 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 TMEM198Q66K66 360 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 OR52E8Q6IFG1 317 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 MRM1Q6IN84 353 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 C8orf74Q6P047 294 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 TAOK1Q7L7X3 1001 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 PAGE2Q7Z2X7 111 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 GOLGA7Q7Z5G4 137 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 RNF175Q8N4F7 328 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 JSRP1Q96MG2 331 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 DOHHQ9BU89 302 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 VPS11Q9H270 941 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 SH2D2AQ9NP31 389 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 RNF11Q9Y3C5 154 aa12.54□□□□□ -0.4
SNRPA1-204ENST00000558020 CELSR1Q9NYQ6 3014 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 HRKO00198 91 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 SMIM24O75264 130 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 EEDO75530 441 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 SNX4O95219 450 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 INHBAP08476 426 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 PEX19P40855 299 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 NR0B1P51843 470 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 NEK2P51955 445 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 RIPPLY3P57055 190 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 KRTAP10-9P60411 292 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 IFT88Q13099 833 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 SLC25A35Q3KQZ1 300 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 C1orf185Q5T7R7 199 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 PRAMEF20Q5VT98 475 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 FRG2Q64ET8 278 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 DGAT2L6Q6ZPD8 337 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 ZNF572Q7Z3I7 529 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 PACS2Q86VP3 889 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 LRRC25Q8N386 305 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms