RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CLDN9O95484 217 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 NADKO95544 446 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-235ENST00000557740 CELA3AP09093 270 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 RBP1P09455 135 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 SERPINB3P29508 390 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 NEK2P51955 445 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 CCNG1P51959 295 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 SLC10A1Q14973 349 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 HYAL4Q2M3T9 481 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 TECRLQ5HYJ1 363 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 PRAMEF20Q5VT98 475 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-235ENST00000557740 OR52E8Q6IFG1 317 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 MRM1Q6IN84 353 aaKnown RBP13.5□□□□□ -0.25
SHMT2-235ENST00000557740 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 FBXW8Q8N3Y1 598 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 ACBD4Q8NC06 268 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 OR10Q1Q8NGQ4 319 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 LILRB4Q8NHJ6 448 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 WDR20Q8TBZ3 569 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 DOK4Q8TEW6 326 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 PAQR8Q8TEZ7 354 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 RIT1Q92963 219 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 SARAFQ96BY9 339 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 GPR78Q96P69 363 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 SERPINI1Q99574 410 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 WWTR1Q9GZV5 400 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 NOL11Q9H8H0 719 aaKnown RBP13.5□□□□□ -0.25
SHMT2-235ENST00000557740 SEMA4BQ9NPR2 832 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-235ENST00000557740 ITGB1BP2Q9UKP3 347 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 TMCO1Q9UM00 188 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 ASB4Q9Y574 426 aa13.5□□□□□ -0.25
SHMT2-235ENST00000557740 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.5□□□□□ -0.25
SHMT2-235ENST00000557740 A0A1B0GVC2 190 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 A0A1W2PR48 441 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 FOXO6A8MYZ6 492 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 SUSD5O60279 629 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 HCN1O60741 890 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 SMIM24O75264 130 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 SEMA3DO95025 777 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 ACSL3O95573 720 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 GBAP04062 536 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 SLC35E2P0CK97 266 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 CAPN3P20807 821 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 SLC37A1P57057 533 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 WLSQ5T9L3 541 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 TAGAPQ8N103 731 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 OR10G3Q8NGC4 313 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 PHF21BQ96EK2 531 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 CDK15Q96Q40 435 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 TREX2Q9BQ50 279 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-235ENST00000557740 UCK2Q9BZX2 261 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 ZNF703Q9H7S9 590 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-235ENST00000557740 MCCC2Q9HCC0 563 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 RYDENQ9NUL5 291 aaKnown RBP13.49□□□□□ -0.25
SHMT2-235ENST00000557740 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 CNIH4Q9P003 139 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 TNFRSF10DQ9UBN6 386 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 B4GALT7Q9UBV7 327 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 ADGRG4Q8IZF6 3080 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 F8P00451 2351 aa13.49□□□□□ -0.25
SHMT2-235ENST00000557740 TRGV5A0A0B4J1U4 118 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 WDR1O75083 606 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 FBXO45P0C2W1 286 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 PIK3R1P27986 724 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 MSX1P28360 303 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 GALNSP34059 522 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 SERPINB9P50453 376 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 IFT88Q13099 833 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 EBPQ15125 230 aaKnown RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 WHAMMP3Q1A5X7 153 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 C10orf62Q5T681 223 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 UBAP2Q5T6F2 1119 aaKnown RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 HLA-DQA1Q5Y7H0 255 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 FRG2Q64ET8 278 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 LYPD8Q6UX82 237 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 PAGE2Q7Z2X7 111 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 CDH24Q86UP0 819 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 PLD6Q8N2A8 252 aaKnown RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 OR52B6Q8NGF0 335 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 SLC44A1Q8WWI5 657 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 JSRP1Q96MG2 331 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 FRG2BQ96QU4 278 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 PAFAH2Q99487 392 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 TTYH2Q9BSA4 534 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 DOHHQ9BU89 302 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 SH2D2AQ9NP31 389 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 ZFP64Q9NPA5 681 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 NPDC1Q9NQX5 325 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 TEX10Q9NXF1 929 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 PCTPQ9UKL6 214 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 FAM215AQ9Y5M1 114 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 CHCHD2Q9Y6H1 151 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-235ENST00000557740 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
SHMT2-235ENST00000557740 PDZD2O15018 2839 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms