RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 CPNE2Q96FN4 548 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF583Q96ND8 569 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 NIPSNAP1Q9BPW8 284 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 THAP7Q9BT49 309 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-223ENST00000557005 HOXD1Q9GZZ0 328 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 LMAN2LQ9H0V9 348 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 TMEM185BQ9H7F4 350 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 CUEDC1Q9NWM3 386 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-223ENST00000557005 CNIH4Q9P003 139 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 CLEC2DQ9UHP7 191 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 ASB1Q9Y576 335 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 NUBP2Q9Y5Y2 271 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 IRAK3Q9Y616 596 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 STON1Q9Y6Q2 735 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 OR6C74A6NCV1 312 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 MEN1O00255 615 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 ANKRD28O15084 1053 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 C1QAP02745 245 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 WASP42768 502 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 DOC2AQ14183 400 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 GRB14Q14449 540 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 SF3A2Q15428 464 aaKnown RBP4.76□□□□□ -1.65
SYNE2-223ENST00000557005 TATDN3Q17R31 274 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 UGT3A2Q3SY77 523 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 AGMOQ6ZNB7 445 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 TMEM17Q86X19 198 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 PIANPQ8IYJ0 282 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 NLGN4XQ8N0W4 816 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 GDPD1Q8N9F7 314 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 LMNTD1Q8N9Z9 388 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 OR5D16Q8NGK9 328 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 OR5W2Q8NH69 310 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 GIMAP1Q8WWP7 306 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 OSTF1Q92882 214 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 UBXN10Q96LJ8 280 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 ADAD1Q96M93 576 aaKnown RBP4.76□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF558Q96NG5 402 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF285Q96NJ3 590 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 BCL2L14Q9BZR8 327 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 EGLN3Q9H6Z9 239 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 PCDHGB2Q9Y5G2 931 aa4.76□□□□□ -1.65
SYNE2-223ENST00000557005 A0A1B0GTL3 188 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 C13orf42A0A1B0GVH6 325 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 HHLA1C9JL84 531 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 RNF13O43567 381 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PRMT3O60678 531 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 HCN1O60741 890 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MT-ND5P03915 603 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 HRGP04196 525 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 IGFBP6P24592 240 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 DNASE1P24855 282 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PITPNBP48739 271 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PRR5P85299 388 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ID2Q02363 134 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CRYZQ08257 329 aaKnown RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GPR33Q49SQ1 333 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PLEKHS1Q5SXH7 462 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF767PQ75MW2 155 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CBLL1Q75N03 491 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GDPD3Q7L5L3 318 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TMED4Q7Z7H5 227 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NUDT13Q86X67 352 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SH3RF2Q8TEC5 729 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SORCS1Q8WY21 1168 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ST8SIA2Q92186 375 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 HYLS1Q96M11 299 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NECTIN4Q96NY8 510 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NEDD4LQ96PU5 975 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GMLQ99445 158 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TM9SF2Q99805 663 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CKLFQ9UBR5 152 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 POLR1DQ9Y2S0 133 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 B8ZZF3 427 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MCIDASD6RGH6 385 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 INPPL1O15357 1258 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC25A12O75746 678 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SPDEFO95238 335 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TFP02787 698 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 EPHX1P07099 455 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 FOSL2P15408 326 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CELP19835 753 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 DRD5P21918 477 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NAA10P41227 235 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GDI2P50395 445 aaKnown RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GRIK2Q13002 908 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 BTN1A1Q13410 526 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 LRRC32Q14392 662 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ATXN7L3Q14CW9 347 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 FAAH2Q6GMR7 532 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC46A3Q7Z3Q1 461 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 KRT77Q7Z794 578 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ADGRG2Q8IZP9 1017 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 FTMTQ8N4E7 242 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 COX18Q8N8Q8 333 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SETD6Q8TBK2 473 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TRIM43Q96BQ3 446 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 OTUB2Q96DC9 234 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TMEM19Q96HH6 336 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 IL17FQ96PD4 163 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms