RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 PDLIM2Q96JY6 352 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 KRT12Q99456 494 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 WDR83Q9BRX9 315 aaKnown RBP6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 CAPS2Q9BXY5 557 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 DERL2Q9GZP9 239 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 REXO4Q9GZR2 422 aaKnown RBP6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 RHOJQ9H4E5 214 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 PLAC1Q9HBJ0 212 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 POPDC3Q9HBV1 291 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 NECTIN3Q9NQS3 549 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 PRTFDC1Q9NRG1 225 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 CD274Q9NZQ7 290 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 ERVK-11Q9UQG0 969 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 KLF13Q9Y2Y9 288 aaPredicted RBP6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 SNX24Q9Y343 169 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 CSMD2Q7Z408 3487 aa6.19□□□□□ -1.42
AL390334.1-204ENST00000556890 IGKV3D-11A0A0A0MRZ8 115 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CTAGE15A4D2H0 777 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ANKRD34BA5PLL1 514 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SYNDIG1LA6NDD5 238 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 C9orf118A6NHY6 69 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 USP27XA6NNY8 438 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 C4orf51C9J302 202 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 E7ESA3 106 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PHGDHO43175 533 aaKnown RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ZNHIT1O43257 154 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CCNT2O60583 730 aaKnown RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ITGA10O75578 1167 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 STK16O75716 305 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PIAS1O75925 651 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 WISP2O76076 250 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CLDN14O95500 239 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 IFNA16P05015 189 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 TPOP07202 933 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CCDC166P0CW27 439 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SMIM10L1P0DMW3 83 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PRF1P14222 555 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 STMN1P16949 149 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 AGAP20933 346 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ELAVL4P26378 380 aaKnown RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CERS1P27544 350 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SSTR1P30872 391 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 HNRNPH1P31943 449 aaKnown RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PTGER1P34995 402 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PTGER4P35408 488 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 RFC3P40938 356 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SLC6A12P48065 614 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 HSPA7P48741 367 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SSR4P51571 173 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 MTTPP55157 894 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 HSD17B7P56937 341 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 GPR85P60893 370 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ADORA2A-AS1P86434 159 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 STX4Q12846 297 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 BMPR2Q13873 1038 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 TERF2Q15554 542 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 TGFBIQ15582 683 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PDK4Q16654 411 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 HIST2H2ACQ16777 129 aaPredicted RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 FBXO48Q5FWF7 155 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 XKR6Q5GH73 641 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PAGE2BQ5JRK9 111 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PRR31Q5SQ13 230 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 HIST2H2AA3Q6FI13 130 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SULT1C3Q6IMI6 304 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CD300LDQ6UXZ3 194 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 Q6ZPB1 254 aaPredicted RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CLNKQ7Z7G1 428 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CTAGE6Q86UF2 777 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 GPSM1Q86YR5 675 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SIAH3Q8IW03 269 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CEP97Q8IW35 865 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ZNF595Q8IYB9 648 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SPATA6LQ8N4H0 392 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 NFAM1Q8NET5 270 aaPredicted RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 OR2L5Q8NG80 312 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 AGAP11Q8TF27 550 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CA5BP1Q8WTZ4 195 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ANKRD49Q8WVL7 239 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ASB15Q8WXK1 588 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 NCLNQ969V3 563 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 MTFMTQ96DP5 389 aaKnown RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 MS4A6EQ96DS6 147 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PTCD3Q96EY7 689 aaKnown RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SMIM10Q96HG1 83 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 DOCK7Q96N67 2140 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CPNE1Q99829 537 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SSBP3Q9BWW4 388 aaPredicted RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 NPLQ9BXD5 320 aaPredicted RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 PITHD1Q9GZP4 211 aaPredicted RBP6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 DPH5Q9H2P9 285 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 CAB39LQ9H9S4 337 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 SAYSD1Q9NPB0 183 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 ADAP2Q9NPF8 381 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 DNAJC11Q9NVH1 559 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 MOCS1Q9NZB8 636 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 GPRC5BQ9NZH0 403 aa6.18□□□□□ -1.42
AL390334.1-204ENST00000556890 COQ3Q9NZJ6 369 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms