RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 C1orf21Q9H246 121 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 ADNPQ9H2P0 1102 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 DPEP3Q9H4B8 488 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 PIGVQ9NUD9 493 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 NINJ2Q9NZG7 142 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 SPASTQ9UBP0 616 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 TSPAN16Q9UKR8 245 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.33□□□□□ -1.88
FCF1-208ENST00000556814 PIN4Q9Y237 131 aaKnown RBP3.33□□□□□ -1.88
FCF1-208ENST00000556814 SMAD5-AS1Q9Y6J3 95 aa3.33□□□□□ -1.88
FCF1-208ENST00000556814 TRBV5-4A0A0C4DH59 114 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 MACROD2A1Z1Q3 448 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 TRIM49BA6NDI0 452 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 SRRM4A7MD48 611 aaKnown RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 SHISA9B4DS77 424 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 NEDD8-MDP1E9PL57 170 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 OR6A2O95222 327 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 PDGFBP01127 241 aaPredicted RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 MMP10P09238 476 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CT45A8P0DMV1 189 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CT45A9P0DMV2 189 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CCDC192P0DO97 292 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CYP3A5P20815 502 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 GLRA1P23415 457 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 SPRP35270 261 aaPredicted RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 CD86P42081 329 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CAMLGP49069 296 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 PRELPP51888 382 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CNN1P51911 297 aaKnown RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 RPS27AP62979 156 aaKnown RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 HSPA14Q0VDF9 509 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 COX10Q12887 443 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 MSLNQ13421 630 aaPredicted RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 STX1AQ16623 288 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CT45A2Q5DJT8 189 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 C9orf66Q5T8R8 295 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 AGAP7PQ5VUJ5 663 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 EMBQ6PCB8 327 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 MFSD7Q6UXD7 560 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 DLEU7Q6UYE1 221 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 MIER3Q7Z3K6 550 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 LRRC49Q8IUZ0 686 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 SLC39A11Q8N1S5 342 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 GVQW1Q8N7I0 195 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 MRPL43Q8N983 215 aaKnown RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 SIDT2Q8NBJ9 832 aaKnown RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 ICA1LQ8NDH6 482 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 SLCO4A1Q96BD0 722 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 TBC1D31Q96DN5 1066 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 CXorf58Q96LI9 332 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 RAB40CQ96S21 281 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 KRT23Q9C075 422 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 TRIM10Q9UDY6 481 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 NARFQ9UHQ1 456 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 HOOK1Q9UJC3 728 aaKnown RBP3.32□□□□□ -1.88
FCF1-208ENST00000556814 SPATA2Q9UM82 520 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 OR1A2Q9Y585 309 aa3.32□□□□□ -1.88
FCF1-208ENST00000556814 LOC390937A0A1W2PQ73 354 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 CFAP73A6NFT4 308 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 ARHGAP42A6NI28 874 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 SH3BGRLO75368 114 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 B3GALNT1O75752 331 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 CPNE6O95741 557 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 HPP00738 406 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 MT-ND1P03886 318 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 FHP07954 510 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 SFTPBP07988 381 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 ZNF18P17022 549 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 IL10P22301 178 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 GPX3P22352 226 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 ALDH3B1P43353 468 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 NSFP46459 744 aaKnown RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 ATXN3P54252 364 aaPredicted RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 GEMP55040 296 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 HERV-K104P63124 156 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 CDKL1Q00532 357 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 ZFP36L1Q07352 338 aaKnown RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 HEPACAMQ14CZ8 416 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 OR1C1Q15619 314 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 CCDC40Q4G0X9 1142 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 TOR1AIP1Q5JTV8 583 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 DDI2Q5TDH0 399 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 LIPJQ5W064 366 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 OR6B2Q6IFH4 312 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 ISLR2Q6UXK2 745 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 WDR88Q6ZMY6 472 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 TIPARPQ7Z3E1 657 aaKnown RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 KDM8Q8N371 416 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 ZNF781Q8N8C0 355 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 FAM111AQ96PZ2 611 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 AGPAT1Q99943 283 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 DCTN5Q9BTE1 182 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 CCDC28BQ9BUN5 200 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 WWP1Q9H0M0 922 aa3.31□□□□□ -1.88
FCF1-208ENST00000556814 PNNQ9H307 717 aaKnown RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 FAM212BQ9NTI7 297 aaPredicted RBP3.31□□□□□ -1.88
FCF1-208ENST00000556814 ACOXLQ9NUZ1 547 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms