RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 FAM174BQ3ZCQ3 159 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 AGKQ53H12 422 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 SFT2D3Q587I9 215 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 ATP1A1-AS1Q5TC04 95 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 OR4F3Q6IEY1 312 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 CAMKMTQ7Z624 323 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 SPACA3Q8IXA5 215 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 CCDC116Q8IYX3 515 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 SUN3Q8TAQ9 357 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 ADAMTS17Q8TE56 1095 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 DOK4Q8TEW6 326 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 DCBLD2Q96PD2 775 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 BBS4Q96RK4 519 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 CCNL2Q96S94 520 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-211ENST00000556536 ZBTB18Q99592 522 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 PRPF18Q99633 342 aaKnown RBP16.29■□□□□ 0.2
TUBB3-211ENST00000556536 PNO1Q9NRX1 252 aaKnown RBP16.29■□□□□ 0.2
TUBB3-211ENST00000556536 ARMCX1Q9P291 453 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 MAPRE3Q9UPY8 281 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 ENTPD4Q9Y227 616 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 SSUH2Q9Y2M2 353 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 LOC102723996A0A087X1L8 192 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 FAM234BA2RU67 622 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 PDPK1O15530 556 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 IFNA16P05015 189 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 PORP16435 677 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 POLR2JP52435 117 aaKnown RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 WNT3P56703 355 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 LTB4RQ15722 352 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 CEBPEQ15744 281 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 CPZQ66K79 652 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 KIRREL2Q6UWL6 708 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 CPEB2Q7Z5Q1 589 aaKnown RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 ST13P4Q8IZP2 240 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 LRRC25Q8N386 305 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 GLB1L3Q8NCI6 653 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 CCDC197Q8NCU1 140 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 DGAT2Q96PD7 388 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 WDR77Q9BQA1 342 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 DUSP26Q9BV47 211 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 BHLHE41Q9C0J9 482 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-211ENST00000556536 MYLK2Q9H1R3 596 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 GIMAP4Q9NUV9 329 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 ATAD3AQ9NVI7 634 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 CCDC167Q9P0B6 97 aa16.28■□□□□ 0.2
TUBB3-211ENST00000556536 CDC14CA4D256 554 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 RRP8O43159 456 aaKnown RBP16.27■□□□□ 0.2
TUBB3-211ENST00000556536 OR10H2O60403 315 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 CCDC22O60826 627 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 NTSP30990 170 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 S100A3P33764 101 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 FRKP42685 505 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-211ENST00000556536 KIR3DL1P43629 444 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 NCBP2P52298 156 aaKnown RBP eCLIP16.27■□□□□ 0.2
TUBB3-211ENST00000556536 SRSF11Q05519 484 aaKnown RBP16.27■□□□□ 0.2
TUBB3-211ENST00000556536 KLF10Q13118 480 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 PCOLCEQ15113 449 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 BLOC1S3Q6QNY0 202 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 GK5Q6ZS86 529 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 MRGPREQ86SM8 312 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 OR11G2Q8NGC1 345 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 OR8J2Q8NGG1 315 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 PTPMT1Q8WUK0 201 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-211ENST00000556536 VPS33AQ96AX1 596 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 CRELD1Q96HD1 420 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 AMDHD1Q96NU7 426 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 GLIPR2Q9H4G4 154 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 SLC52A3Q9NQ40 469 aa16.27■□□□□ 0.2
TUBB3-211ENST00000556536 C19orf25Q9UFG5 118 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-211ENST00000556536 NUP210LQ5VU65 1888 aa16.27■□□□□ 0.19
TUBB3-211ENST00000556536 IGHV1-45A0A0A0MS14 117 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 MASP2O00187 686 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 NR5A2O00482 541 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 SCN2BO60939 215 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 SEC24DO94855 1032 aaPredicted RBP16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ATP1B1P05026 303 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 PGRP06401 933 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 PRKAR1AP10644 381 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 COX6A1P12074 109 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 DDX5P17844 614 aaKnown RBP16.26■□□□□ 0.19
TUBB3-211ENST00000556536 TNNI3P19429 210 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 NT5EP21589 574 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 SOX18P35713 384 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 PLIN5Q00G26 463 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 BIKQ13323 160 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ATP1A4Q13733 1029 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 RCAN2Q14206 197 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ELAVL1Q15717 326 aaKnown RBP16.26■□□□□ 0.19
TUBB3-211ENST00000556536 DPY19L1Q2PZI1 675 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 TIGD2Q4W5G0 525 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ZNF551Q7Z340 670 aaPredicted RBP16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ANKRD46Q86W74 232 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 RAB43Q86YS6 212 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 SAMD14Q8IZD0 417 aaPredicted RBP16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ADCY4Q8NFM4 1077 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 OR9A2Q8NGT5 310 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 RBM18Q96H35 190 aaKnown RBP16.26■□□□□ 0.19
TUBB3-211ENST00000556536 CCDC106Q9BWC9 280 aa16.26■□□□□ 0.19
TUBB3-211ENST00000556536 ZNF700Q9H0M5 742 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms