RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TPM4P67936 248 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 OLR1P78380 273 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 PRAMEP78395 509 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 RPS6KA1Q15418 735 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 SF3B4Q15427 424 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 KLHL38Q2WGJ6 581 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 DEFB134Q4QY38 66 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ACSBG2Q5FVE4 666 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 HECTD2Q5U5R9 776 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 NIPAL1Q6NVV3 410 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 GGNQ86UU5 652 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 KATNAL2Q8IYT4 538 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 MFSD9Q8NBP5 474 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF740Q8NDX6 193 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ADCY4Q8NFM4 1077 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 OR52K1Q8NGK4 314 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 IGFBPL1Q8WX77 278 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 NTNG2Q96CW9 530 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF778Q96MU6 729 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 TIMP4Q99727 224 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 SPATA25Q9BR10 227 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF703Q9H7S9 590 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 CLK4Q9HAZ1 481 aaKnown RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 PNO1Q9NRX1 252 aaKnown RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF701Q9NV72 531 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 QPCTLQ9NXS2 382 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 GALNT8Q9NY28 637 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 MARCH4Q9P2E8 410 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ANAPC5Q9UJX4 755 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 TESMINQ9Y4I5 508 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 KIAA1549Q9HCM3 1950 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 C15orf38-AP3S2A0A0A6YYH1 394 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 GRID2IPA4D2P6 1211 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 MBD3L3A6NE82 208 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 A8MV72 311 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PSMD12O00232 456 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CD3EAPO15446 510 aaKnown RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 KCNAB3O43448 404 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF354AO60765 605 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 TMCC2O75069 709 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 ERN1O75460 977 aaKnown RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 NDUFS3O75489 264 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 SIX3O95343 332 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CCL3P10147 92 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 RNH1P13489 461 aaKnown RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PAMP19021 973 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 ADRA1DP25100 572 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 THBS2P35442 1172 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 GRK3P35626 688 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PIGAP37287 484 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 MC3RP41968 323 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 TRPC1P48995 793 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 MARCKSL1P49006 195 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 NR1H2P55055 460 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 EIF3BP55884 814 aaKnown RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 ATP5J2P56134 94 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CRYZQ08257 329 aaKnown RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 DUSP8Q13202 625 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 KCNJ11Q14654 390 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CTSL3PQ5NE16 218 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 RNF187Q5TA31 235 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 OPN5Q6U736 354 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 HSDL2Q6YN16 418 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF662Q6ZS27 426 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PLEKHM3Q6ZWE6 761 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 LUZP2Q86TE4 346 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 LINC00523Q86TU6 105 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CNGA4Q8IV77 575 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PM20D2Q8IYS1 436 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 SLC35F6Q8N357 371 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 LRRC25Q8N386 305 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 RASGEF1CQ8N431 466 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 LIX1Q8N485 282 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 LRRC57Q8N9N7 239 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PPHLN1Q8NEY8 458 aaKnown RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 MBD3L2Q8NHZ7 208 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PEX13Q92968 403 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 PIK3IP1Q96FE7 263 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 WFIKKN1Q96NZ8 548 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 BIRC8Q96P09 236 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 REG4Q9BYZ8 158 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 AMBRA1Q9C0C7 1298 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 SLC6A15Q9H2J7 730 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CALHM2Q9HA72 323 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 SH2D2AQ9NP31 389 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CATSPERZQ9NTU4 200 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 CGGBP1Q9UFW8 167 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 BOKQ9UMX3 212 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-236ENST00000556220 MMACHCQ9Y4U1 282 aa6.26□□□□□ -1.41
ATXN3-236ENST00000556220 ALPK2Q86TB3 2170 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 TRRAPQ9Y4A5 3859 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 MACROD2A1Z1Q3 448 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 LRRC3CA6NJW4 275 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 A8MXE2 369 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 H3BMM5 538 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 NDUFS4O43181 175 aa6.25□□□□□ -1.41
ATXN3-236ENST00000556220 SPRY1O43609 319 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-236ENST00000556220 CEP104O60308 925 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms