RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 SH3YL1Q96HL8 342 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 TXNDC15Q96J42 360 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PRAP1Q96NZ9 151 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NAA50Q9GZZ1 169 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 C12orf10Q9HB07 376 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 LANCL2Q9NS86 450 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 MRGBPQ9NV56 204 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NUDT4Q9NZJ9 180 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 DHCR7Q9UBM7 475 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ZMAT5Q9UDW3 170 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PACSIN3Q9UKS6 424 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PCDHGA9Q9Y5G4 932 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 E2F3O00716 465 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ACOX3O15254 700 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NOL3O60936 208 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 KLHL18O94889 574 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SCELO95171 688 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NSA2O95478 260 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PDGFAP04085 211 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 C2P06681 752 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CD63P08962 238 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 LTA4HP09960 611 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CCNYL3P0C7X3 344 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CDH1P12830 882 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 COX4I1P13073 169 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 DDX5P17844 614 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 GRK2P25098 689 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 GSTM2P28161 218 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 OPRL1P41146 370 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SERPINB9P50453 376 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NKX2-5P52952 324 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 TMBIM6P55061 237 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 VSX2P58304 361 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PHC1P78364 1004 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 RHAGQ02094 409 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 C19orf57Q0VDD7 668 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 Q0VFX4 171 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NAE1Q13564 534 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 USP10Q14694 798 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SLC9A5Q14940 896 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 FAM69BQ5VUD6 431 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SULT1C3Q6IMI6 304 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CAPN13Q6MZZ7 669 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 C16orf46Q6P387 395 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 LRRC70Q7Z2Q7 622 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 BTLAQ7Z6A9 289 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 AKAP14Q86UN6 197 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SLC51BQ86UW2 128 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ARMC10Q8N2F6 343 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SPATA6LQ8N4H0 392 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PPM1NQ8N819 430 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 FAM47BQ8NA70 645 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF740Q8NDX6 193 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PIWIL2Q8TC59 973 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 NXNL1Q96CM4 212 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 MOCOSQ96EN8 888 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 SMAD5Q99717 465 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 USB1Q9BQ65 265 aaKnown RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF717Q9BY31 904 aaPredicted RBP3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CD244Q9BZW8 370 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 ARL15Q9NXU5 204 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 CTSFQ9UBX1 484 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 EMCNQ9ULC0 261 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 PPT2Q9UMR5 302 aa3.69□□□□□ -1.82
LINC00648-202ENST00000555985 IGKV3D-11A0A0A0MRZ8 115 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 CLEC18AA5D8T8 446 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 K7EM74 188 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 PCDH17O14917 1159 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 DNAJB6O75190 326 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 BCAS2O75934 225 aaPredicted RBP3.68□□□□□ -1.82
LINC00648-202ENST00000555985 IPO13O94829 963 aaKnown RBP3.68□□□□□ -1.82
LINC00648-202ENST00000555985 BPGMP07738 259 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 MMP11P24347 488 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 MAPK1P28482 360 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 IDH3AP50213 366 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 CCR8P51685 355 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 ARFIP1P53367 373 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 STX1BP61266 288 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 PPP2R2BQ00005 443 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 MS4A2Q01362 244 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 IFITM3Q01628 133 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 KCNAB2Q13303 367 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 BMPR2Q13873 1038 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 PIGGQ5H8A4 983 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 NHSL2Q5HYW2 709 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 TTC33Q6PID6 262 aaPredicted RBP3.68□□□□□ -1.82
LINC00648-202ENST00000555985 IGFL3Q6UXB1 125 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 CLEC18BQ6UXF7 455 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 PLEKHG7Q6ZR37 379 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 PRSS41Q7RTY9 318 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 UBE3DQ7Z6J8 389 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 MRGPREQ86SM8 312 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF786Q8N393 782 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 IL22RA1Q8N6P7 574 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 CSNK1A1LQ8N752 337 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 L3MBTL4Q8NA19 623 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 CLEC18CQ8NCF0 446 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 BHLHE22Q8NFJ8 381 aaPredicted RBP3.68□□□□□ -1.82
LINC00648-202ENST00000555985 TNIP2Q8NFZ5 429 aa3.68□□□□□ -1.82
LINC00648-202ENST00000555985 TFAP2CQ92754 450 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms