RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SPG11Q96JI7 2443 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 A0A096LPK6 155 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 ATP6AP2A0A1C7CYW4 349 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 OR6C76A6NM76 312 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 TMPRSS11DO60235 418 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 OR10H2O60403 315 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 EEDO75530 441 aaKnown RBP18.18■□□□□ 0.5
PRKCH-219ENST00000555906 ATP6AP2O75787 350 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 KLHL2O95198 593 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 GPR75O95800 540 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 FBXO45P0C2W1 286 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 GALNSP34059 522 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 BSGP35613 385 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 PIGAP37287 484 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 GTF2H2Q13888 395 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 SLC10A1Q14973 349 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 EBPQ15125 230 aaKnown RBP18.18■□□□□ 0.5
PRKCH-219ENST00000555906 TESK1Q15569 626 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 GTF2H2CQ6P1K8 395 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 DMRTC2Q8IXT2 367 aaPredicted RBP18.18■□□□□ 0.5
PRKCH-219ENST00000555906 WDR20Q8TBZ3 569 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 GAL3ST4Q96RP7 486 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 IPPKQ9H8X2 491 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 WDR41Q9HAD4 459 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 SEMA4BQ9NPR2 832 aaPredicted RBP18.18■□□□□ 0.5
PRKCH-219ENST00000555906 QPCTLQ9NXS2 382 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 PSD3Q9NYI0 1048 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 CNIH4Q9P003 139 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 ITGB1BP2Q9UKP3 347 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 MED13LQ71F56 2210 aa18.18■□□□□ 0.5
PRKCH-219ENST00000555906 FREM3P0C091 2139 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 TRGV5A0A0B4J1U4 118 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 IQANK1A0A1B0GTG1 560 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 LRRC14BA6NHZ5 514 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 LRRC3CA6NJW4 275 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 FOXE1O00358 373 aaPredicted RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 SEMA3DO95025 777 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 AIFM1O95831 613 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 ALDOAP04075 364 aaKnown RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 FAM58BPP0C7Q3 252 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 GLI4P10075 376 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 ENDOUP21128 410 aaKnown RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 SLC37A1P57057 533 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 ETF1P62495 437 aaKnown RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 KCNJ2P63252 427 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 CPSF6Q16630 551 aaKnown RBP eCLIP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 TECRLQ5HYJ1 363 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 C1orf185Q5T7R7 199 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 WLSQ5T9L3 541 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 PRAMEF20Q5VT98 475 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 RTL6Q6ICC9 239 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 OR52E8Q6IFG1 317 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 CYP20A1Q6UW02 462 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 LRRC25Q8N386 305 aaPredicted RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 RIT1Q92963 219 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 GPR78Q96P69 363 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 LDAHQ9H6V9 325 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 SLC24A3Q9HC58 644 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 ZFP64Q9NPA5 681 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 CPSF2Q9P2I0 782 aaKnown RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 KCNN3Q9UGI6 736 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 ACAD8Q9UKU7 415 aa18.17■□□□□ 0.5
PRKCH-219ENST00000555906 CHCHD2Q9Y6H1 151 aaPredicted RBP18.17■□□□□ 0.5
PRKCH-219ENST00000555906 A0A1W2PR48 441 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 ESYT3A0FGR9 886 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 FAM47E-STBD1D6RA91 191 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 CLPSP04118 112 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 HOXD4P09016 255 aaPredicted RBP18.16■□□□□ 0.5
PRKCH-219ENST00000555906 SERPINB3P29508 390 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 PHBP35232 272 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 ZNF267Q14586 743 aaPredicted RBP18.16■□□□□ 0.5
PRKCH-219ENST00000555906 NTRK2Q16620 822 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 C8orf74Q6P047 294 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 SYT10Q6XYQ8 523 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 FAM13CQ8NE31 585 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 OR10G3Q8NGC4 313 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 ACSS3Q9H6R3 686 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 EXO5Q9H790 373 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 PROK2Q9HC23 129 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 ZDHHC18Q9NUE0 388 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 SPRR3Q9UBC9 169 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 TNFRSF10DQ9UBN6 386 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 B4GALT7Q9UBV7 327 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 PCDHGB3Q9Y5G1 929 aa18.16■□□□□ 0.5
PRKCH-219ENST00000555906 A0A0G2JNJ9 132 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 GLOD5A6NK44 160 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 SIX3O95343 332 aaPredicted RBP18.15■□□□□ 0.5
PRKCH-219ENST00000555906 SLC35E2P0CK97 266 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 GABRA1P14867 456 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 TYK2P29597 1187 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 ZFP36L2P47974 494 aaKnown RBP18.15■□□□□ 0.5
PRKCH-219ENST00000555906 CKAP4Q07065 602 aaKnown RBP18.15■□□□□ 0.5
PRKCH-219ENST00000555906 UAP1Q16222 522 aaPredicted RBP18.15■□□□□ 0.5
PRKCH-219ENST00000555906 TBCELQ5QJ74 424 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 SPNS3Q6ZMD2 512 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 CLYBLQ8N0X4 340 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 TAGAPQ8N103 731 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 ZNF441Q8N8Z8 693 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 OR10Q1Q8NGQ4 319 aa18.15■□□□□ 0.5
PRKCH-219ENST00000555906 MRRFQ96E11 262 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms