RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TAC3Q9UHF0 121 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 PLAGL1Q9UM63 463 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 KLHL20Q9Y2M5 609 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 NUMA1Q14980 2115 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 HTR3EA5X5Y0 456 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 FFAR1O14842 300 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 NDUFS4O43181 175 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 NME6O75414 186 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 MOSPD3O75425 235 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 KLHL18O94889 574 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLITRK5O94991 958 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 MFN2O95140 757 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SOX14O95416 240 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CYP17A1P05093 508 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ADRB3P13945 408 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 GPC1P35052 558 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CCT3P49368 545 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 RORCP51449 518 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CRISP3P54108 245 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 COPZ1P61923 177 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TARDBPQ13148 414 aaKnown RBP eCLIP6.64□□□□□ -1.35
TDP1-213ENST00000555880 GNA13Q14344 377 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ELAVL3Q14576 367 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 PUM1Q14671 1186 aaKnown RBP eCLIP6.64□□□□□ -1.35
TDP1-213ENST00000555880 NCF4Q15080 339 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SPHARQ15513 63 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 PRSS53Q2L4Q9 553 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 LEXMQ3ZCV2 418 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TMEM201Q5SNT2 666 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CCBE1Q6UXH8 406 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 VN1R5Q7Z5H4 357 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CCDC190Q86UF4 302 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 FAM129CQ86XR2 697 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ZNF547Q8IVP9 402 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 NLGN4XQ8N0W4 816 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 OR8H2Q8N162 312 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CLIP4Q8N3C7 705 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 C2orf73Q8N5S3 287 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 VANGL1Q8TAA9 524 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 SETD6Q8TBK2 473 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CXorf40AQ8TE69 158 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 APOBEC4Q8WW27 367 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 SMPDL3AQ92484 453 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 RAB8BQ92930 207 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 EXOSC8Q96B26 276 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 ERLEC1Q96DZ1 483 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ZNF764Q96H86 408 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 F2RL3Q96RI0 385 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CNPPD1Q9BV87 410 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TAPBPLQ9BX59 468 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ASPNQ9BXN1 380 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 MS4A8Q9BY19 250 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 OR52A5Q9H2C5 316 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SIAEQ9HAT2 523 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLC25A19Q9HC21 320 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 MOV10Q9HCE1 1003 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 SMURF1Q9HCE7 757 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 FZD3Q9NPG1 666 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 DNAJC27Q9NZQ0 273 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 REV1Q9UBZ9 1251 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 NDOR1Q9UHB4 597 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 STUB1Q9UNE7 303 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SSR3Q9UNL2 185 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLC9A8Q9Y2E8 581 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLC27A6Q9Y2P4 619 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 INSL6Q9Y581 213 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 IRAK3Q9Y616 596 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 MYO10Q9HD67 2058 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 IRGMA1A4Y4 181 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 SNTNA6NMZ2 147 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 HIDE1A8MVS5 230 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ANHXE9PGG2 379 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 FAM227AF5H4B4 570 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 RTCAO00442 366 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 HMGN4O00479 90 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 HOXC11O43248 304 aaPredicted RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 SPINT1O43278 529 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 DYRK3O43781 588 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 PAPLNO95428 1278 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 DNTTP04053 509 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 KRT8P05787 483 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 HNRNPA1P09651 372 aaKnown RBP eCLIP6.63□□□□□ -1.35
TDP1-213ENST00000555880 CISD3P0C7P0 127 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 SLC35G4P0C7Q5 338 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 NR2F1P10589 423 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 MYL12AP19105 171 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 ITGB8P26012 769 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 NTSP30990 170 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 BSGP35613 385 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 FEN1P39748 380 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 SOX3P41225 446 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 KCNJ5P48544 419 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 KHKP50053 298 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 DGKEP52429 567 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 LIMK1P53667 647 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ZNF91Q05481 1191 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 COX10Q12887 443 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms