RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 QSOX2Q6ZRP7 698 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 LINC00696Q6ZRV3 163 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 CCDC121Q6ZUS5 278 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 COMMD6Q7Z4G1 85 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 MIER2Q8N344 545 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 PLPP5Q8NEB5 264 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 TSLPQ969D9 159 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 SNRNP40Q96DI7 357 aaKnown RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 MS4A6EQ96DS6 147 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 APIPQ96GX9 242 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 FCRL1Q96LA6 429 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 NMUR2Q9GZQ4 415 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 KLHL31Q9H511 634 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 AIG1Q9NVV5 245 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 PTGFRNQ9P2B2 879 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 MCM8Q9UJA3 840 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 VPS4AQ9UN37 437 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 MAPRE3Q9UPY8 281 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 COPG1Q9Y678 874 aaKnown RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 MAST4O15021 2626 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 CCDC88CQ9P219 2028 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 IGHV3-20A0A0C4DH32 117 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 GUCY1B2O75343 617 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 KLK1P06870 262 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 ALDOCP09972 364 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 BCKDHAP12694 445 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 GNLYP22749 145 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 MRPL19P49406 292 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 MAPK12P53778 367 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 DIO3P55073 304 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 MTTPP55157 894 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 ZNF763Q0D2J5 394 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 KIAA0040Q15053 153 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 NSDHLQ15738 373 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 BTBD16Q32M84 506 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 PDCD4Q53EL6 469 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 SFT2D3Q587I9 215 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 CCNYL2Q5T2Q4 361 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 PAPD4Q6PIY7 484 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 CYP20A1Q6UW02 462 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 CLNKQ7Z7G1 428 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 CA13Q8N1Q1 262 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 LIX1Q8N485 282 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 CPSF7Q8N684 471 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 SIRT6Q8N6T7 355 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 DNAJB14Q8TBM8 379 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 ADAMTS18Q8TE60 1221 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 C11orf24Q96F05 449 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 MARK4Q96L34 752 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 SERINC2Q96SA4 455 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 ZBTB18Q99592 522 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 LPAR4Q99677 370 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 NPLQ9BXD5 320 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 BRINP2Q9C0B6 783 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 DDX31Q9H8H2 851 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 SAR1AQ9NR31 198 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 SDR39U1Q9NRG7 319 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 ASF1BQ9NVP2 202 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 TMEM45AQ9NWC5 275 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 DLGAP4Q9Y2H0 992 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 NTNG1Q9Y2I2 539 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 WBP11Q9Y2W2 641 aaKnown RBP9.01□□□□□ -0.97
ACTN1-215ENST00000555616 GPR45Q9Y5Y3 372 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 CAPN7Q9Y6W3 813 aa9.01□□□□□ -0.97
ACTN1-215ENST00000555616 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 TCRBV16S1A1N1A0A5B0 115 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 DYTNA2CJ06 578 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 PSMD12O00232 456 aaPredicted RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 RTCAO00442 366 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 B3GALT2O43825 422 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 PRMT3O60678 531 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 B4GALT2O60909 372 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 SLC22A3O75751 556 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 G6PDP11413 515 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 DDX5P17844 614 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 SDC1P18827 310 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 PRPS1L1P21108 318 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 HIST1H1TP22492 207 aaPredicted RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 ATP5A1P25705 553 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 BSGP35613 385 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 HPCAL1P37235 193 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 RPL3P39023 403 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 TNFSF10P50591 281 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 OR4D2P58180 307 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 SLC26A5P58743 744 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 TRA2BP62995 288 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 BTN3A2P78410 334 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 ARG2P78540 354 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 SRSF1Q07955 248 aaKnown RBP eCLIP9□□□□□ -0.97
ACTN1-215ENST00000555616 UBAP2LQ14157 1087 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 MAPRE2Q15555 327 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 INAQ16352 499 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 H3F3CQ6NXT2 135 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 RPUSD3Q6P087 351 aaKnown RBP9□□□□□ -0.97
ACTN1-215ENST00000555616 IKBIPQ70UQ0 350 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 UBE3DQ7Z6J8 389 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 SCUBE1Q8IWY4 988 aa9□□□□□ -0.97
ACTN1-215ENST00000555616 LGI4Q8N135 537 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms