RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NME6O75414 186 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ERAL1O75616 437 aaKnown RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ATP6AP2O75787 350 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 WISP2O76076 250 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ANXA4P09525 319 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SLC35E2P0CK97 266 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 CPMP14384 443 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 PRPH2P23942 346 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 PIK3R1P27986 724 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SSTR4P31391 388 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 CLCN2P51788 898 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ABCE1P61221 599 aaKnown RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 PLIN5Q00G26 463 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 MGAT2Q10469 447 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 BST1Q10588 318 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 DUSP8Q13202 625 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF267Q14586 743 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF169Q14929 603 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 NR6A1Q15406 480 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 LTB4RQ15722 352 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 INPP5JQ15735 1006 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 MEP1AQ16819 746 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 RFTN2Q52LD8 501 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 XKR7Q5GH72 579 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 AGBL2Q5U5Z8 902 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 HHATQ5VTY9 493 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 FAM71E1Q6IPT2 247 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 NOXRED1Q6NXP6 359 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 FAM111BQ6SJ93 734 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 HPS6Q86YV9 775 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 DDIASQ8IXT1 998 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SLC5A8Q8N695 610 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 MORN4Q8NDC4 146 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 OR4K14Q8NGD5 310 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 PPP1R14CQ8TAE6 165 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 DAZLQ92904 295 aaKnown RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 KLHL29Q96CT2 875 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SNRNP40Q96DI7 357 aaKnown RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SENP5Q96HI0 755 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-214ENST00000554928 FCRL1Q96LA6 429 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF681Q96N22 645 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 CNPPD1Q9BV87 410 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 CXorf21Q9HAI6 301 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 LRTM1Q9HBL6 345 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SLAMF7Q9NQ25 335 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 CPAMD8Q8IZJ3 1885 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 CNTRLQ7Z7A1 2325 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 DYTNA2CJ06 578 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 NPIPB8E9PQR5 432 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 WWP2O00308 870 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 LSM1O15116 133 aaKnown RBP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 SEC22BO75396 215 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 HSPA4LO95757 839 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 S1PR1P21453 382 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 HK2P52789 917 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 AP2B1P63010 937 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 RPL38P63173 70 aaKnown RBP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 RNF4P78317 190 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 PMP22Q01453 160 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 GALNTL6Q49A17 601 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 ANKRD26P1Q6NSI1 321 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 RNF165Q6ZSG1 346 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 ARMC10Q8N2F6 343 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 MDS2Q8NDY4 140 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 ADCY4Q8NFM4 1077 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 CLHC1Q8NHS4 586 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 CPT1CQ8TCG5 803 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 RIT1Q92963 219 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 GFM2Q969S9 779 aaKnown RBP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 MIB2Q96AX9 1013 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 RBM18Q96H35 190 aaKnown RBP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 FBXL20Q96IG2 436 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 PPP1R36Q96LQ0 422 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 TAAR6Q96RI8 345 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 SH3GL2Q99962 352 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 RNF32Q9H0A6 362 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 ANKRA2Q9H9E1 313 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 EML4Q9HC35 981 aaKnown RBP11.47□□□□□ -0.57
SYNE2-214ENST00000554928 ASF1BQ9NVP2 202 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 PNPOQ9NVS9 261 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF446Q9NWS9 450 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 C1orf109Q9NX04 203 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 BAIAP2L1Q9UHR4 511 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 DTX4Q9Y2E6 619 aa11.47□□□□□ -0.57
SYNE2-214ENST00000554928 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.57
SYNE2-214ENST00000554928 GOLGA6L10A6NI86 522 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 TMEM114B3SHH9 223 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 RGS14O43566 566 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 PEX11AO75192 247 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 ITGA10O75578 1167 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 OR2J2O76002 312 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 NEURL1O76050 574 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 ZFAND5O76080 213 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 PORP16435 677 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms