RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 MMP28Q9H239 520 aa5□□□□□ -1.61
HCFC2-204ENST00000550335 ZNF71Q9NQZ8 489 aaPredicted RBP5□□□□□ -1.61
HCFC2-204ENST00000550335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5□□□□□ -1.61
HCFC2-204ENST00000550335 TEX10Q9NXF1 929 aaPredicted RBP5□□□□□ -1.61
HCFC2-204ENST00000550335 BCAP29Q9UHQ4 241 aa5□□□□□ -1.61
HCFC2-204ENST00000550335 LAMP5Q9UJQ1 280 aa5□□□□□ -1.61
HCFC2-204ENST00000550335 SNX6Q9UNH7 406 aa5□□□□□ -1.61
HCFC2-204ENST00000550335 PPP1R3CQ9UQK1 317 aa5□□□□□ -1.61
HCFC2-204ENST00000550335 U3KQV3 271 aa5□□□□□ -1.61
HCFC2-204ENST00000550335 DIP2CQ9Y2E4 1556 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 CNTLNQ9NXG0 1405 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 SYCP2Q9BX26 1530 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 SERINC4A6NH21 518 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 NKX6-3A6NJ46 265 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 H0YCG3 227 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 CCSO14618 274 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 AP2A2O94973 939 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 IGHEP01854 428 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 VTNP04004 478 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 PRSS56P0CW18 603 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 CALCBP10092 127 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 EPB41P11171 864 aaKnown RBP4.99□□□□□ -1.61
HCFC2-204ENST00000550335 PRG2P13727 222 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 FCARP24071 287 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 NPY2RP49146 381 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 RAG2P55895 527 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 ABCE1P61221 599 aaKnown RBP4.99□□□□□ -1.61
HCFC2-204ENST00000550335 RPS4XP62701 263 aaKnown RBP4.99□□□□□ -1.61
HCFC2-204ENST00000550335 HSPA14Q0VDF9 509 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 SRSF9Q13242 221 aaKnown RBP eCLIP4.99□□□□□ -1.61
HCFC2-204ENST00000550335 DRP2Q13474 957 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 P2RY14Q15391 338 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 TEAD2Q15562 447 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 TAB1Q15750 504 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 FAM189A2Q15884 450 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 DDI2Q5TDH0 399 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 FAM159AQ6UWV7 190 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 Q6ZRG5 221 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 LINC00518Q8N0U6 118 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 MLKLQ8NB16 471 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 MINDY2Q8NBR6 621 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 OR5T2Q8NGG2 359 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 GATAD1Q8WUU5 269 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 TCP11Q8WWU5 503 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 TMEM37Q8WXS4 190 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 RAB7BQ96AH8 199 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 RBM18Q96H35 190 aaKnown RBP4.99□□□□□ -1.61
HCFC2-204ENST00000550335 TTC25Q96NG3 672 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 INPP4AQ96PE3 977 aaPredicted RBP4.99□□□□□ -1.61
HCFC2-204ENST00000550335 NLNQ9BYT8 704 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 PLEKHA3Q9HB20 300 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 SLC25A19Q9HC21 320 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 LHX3Q9UBR4 397 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 ZHX2Q9Y6X8 837 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 KIDINS220Q9ULH0 1771 aa4.99□□□□□ -1.61
HCFC2-204ENST00000550335 MYOM3Q5VTT5 1437 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 SCN5AQ14524 2016 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 BLOC1S5-TXNDC5H3BN57 136 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 SH2D1BO14796 132 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 PCDH7O60245 1069 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 CYP11B1P15538 503 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 TSPAN8P19075 237 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 TNNI3P19429 210 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 GLRA1P23415 457 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 PSMA5P28066 241 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 PEX3P56589 373 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 DHODHQ02127 395 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 RBBP4Q09028 425 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 MTF1Q14872 753 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ZKSCAN8Q15776 578 aaPredicted RBP4.98□□□□□ -1.61
HCFC2-204ENST00000550335 SGSM1Q2NKQ1 1148 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 RFTN2Q52LD8 501 aaPredicted RBP4.98□□□□□ -1.61
HCFC2-204ENST00000550335 TCHHL1Q5QJ38 904 aaPredicted RBP4.98□□□□□ -1.61
HCFC2-204ENST00000550335 C9orf50Q5SZB4 431 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 RIPPLY2Q5TAB7 128 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 CWC27Q6UX04 472 aaKnown RBP4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ASRGL1Q7L266 308 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 SMIM29Q86T20 159 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 CERS5Q8N5B7 392 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 BCORP1Q8N888 145 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 GMCL1P1Q8NEA9 526 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 OR9Q2Q8NGE9 314 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 DQX1Q8TE96 717 aaKnown RBP4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ZNRF4Q8WWF5 429 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 LURAP1Q96LR2 239 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 FAM218AQ96MZ4 157 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 NODALQ96S42 347 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ERP44Q9BS26 406 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ATXN10Q9UBB4 475 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 LNPEPQ9UIQ6 1025 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 MFHAS1Q9Y4C4 1052 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 A2MP01023 1474 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 CCDC141Q6ZP82 1450 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ARHGEF5Q12774 1597 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 INO80Q9ULG1 1556 aaPredicted RBP4.98□□□□□ -1.61
HCFC2-204ENST00000550335 PCSK5Q92824 1860 aa4.98□□□□□ -1.61
HCFC2-204ENST00000550335 ATP7AQ04656 1500 aa4.97□□□□□ -1.61
HCFC2-204ENST00000550335 FAM135AQ9P2D6 1515 aa4.97□□□□□ -1.61
HCFC2-204ENST00000550335 ABCA6Q8N139 1617 aa4.97□□□□□ -1.61
HCFC2-204ENST00000550335 PLXNC1O60486 1568 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms