RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 DEPDC1Q5TB30 811 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 FBXW10Q5XX13 1052 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 GRHL2Q6ISB3 625 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 LYPD8Q6UX82 237 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 ZCCHC7Q8N3Z6 543 aaKnown RBP12.48□□□□□ -0.41
TROAP-211ENST00000549891 OR7G3Q8NG95 312 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 OR10G3Q8NGC4 313 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 PPWD1Q96BP3 646 aaKnown RBP12.48□□□□□ -0.41
TROAP-211ENST00000549891 HSPBAP1Q96EW2 488 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 UBXN10Q96LJ8 280 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 RBBP8Q99708 897 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 WWTR1Q9GZV5 400 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 SLC6A15Q9H2J7 730 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 WDR41Q9HAD4 459 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 NUDT4Q9NZJ9 180 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 LRRC3CA6NJW4 275 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 K7EPI3 171 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 TP73O15350 636 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 PROM1O43490 865 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 SNX4O95219 450 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 C1QAP02745 245 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 EPB42P16452 691 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 CEACAM8P31997 349 aaPredicted RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 GP5P40197 560 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 PIK3CBP42338 1070 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 TRPC1P48995 793 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 TMED10P49755 219 aaKnown RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 HERVK_113P63132 956 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 ERVK-8P63133 956 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 DUSP8Q13202 625 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 SNTB1Q13884 538 aaKnown RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 ZNF267Q14586 743 aaPredicted RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 ZKSCAN8Q15776 578 aaPredicted RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 CDC20BQ86Y33 519 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 RELL2Q8NC24 303 aaPredicted RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 DIO2Q92813 273 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 RIT1Q92963 219 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 MBD6Q96DN6 1003 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 SH3GL2Q99962 352 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 ERVK-6Q9BXR3 956 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 OR51B5Q9H339 312 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 LIME1Q9H400 295 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 ALG9Q9H6U8 611 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 PROK2Q9HC23 129 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 SMYD2Q9NRG4 433 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 LYARQ9NX58 379 aaKnown RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 ERVK-19Q9WJR5 959 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 PLEKHA6Q9Y2H5 1048 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
TROAP-211ENST00000549891 ACANP16112 2415 aa12.47□□□□□ -0.41
TROAP-211ENST00000549891 DOCK7Q96N67 2140 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 SUPT3HB4E1H0 165 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 HRKO00198 91 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 TRIM3O75382 744 aaPredicted RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 SUPT3HO75486 399 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 PIAS1O75925 651 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 GOSR1O95249 250 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 GPR75O95800 540 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 SSTR1P30872 391 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 GALNSP34059 522 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 SPRP35270 261 aaPredicted RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 PAFAH1B1P43034 410 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 SLC37A1P57057 533 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 CALCOCO2Q13137 446 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 DDX39BQ13838 428 aaKnown RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 DAZAP2Q15038 168 aaPredicted RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 EBPQ15125 230 aaKnown RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 RPS6KA2Q15349 733 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 LIPJQ5W064 366 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 HLA-DQA1Q5Y7H0 255 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 C18orf63Q68DL7 685 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 DGAT2L6Q6ZPD8 337 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 RAPH1Q70E73 1250 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 CYS1Q717R9 158 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 TBC1D1Q86TI0 1168 aaPredicted RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 PACS2Q86VP3 889 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 TNIP2Q8NFZ5 429 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 HUS1BQ8NHY5 278 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 UBTD2Q8WUN7 234 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 TP53INP1Q96A56 240 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 REPS1Q96D71 796 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 SECISBP2Q96T21 854 aaKnown RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 NMRAL1Q9HBL8 299 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 DMRT3Q9NQL9 472 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 SNX15Q9NRS6 342 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 CNOT11Q9UKZ1 510 aaKnown RBP12.46□□□□□ -0.41
TROAP-211ENST00000549891 CBLCQ9ULV8 474 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 TSC22D4Q9Y3Q8 395 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 ANGPTL3Q9Y5C1 460 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 PCDHGA11Q9Y5H2 935 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 IKBKGQ9Y6K9 419 aa12.46□□□□□ -0.41
TROAP-211ENST00000549891 VPS13CQ709C8 3753 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms