RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 C1orf226A1L170 272 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 SEC16AO15027 2179 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 CPNE3O75131 537 aaKnown RBP15.5■□□□□ 0.07
CUX1-213ENST00000549414 RPP14O95059 124 aaKnown RBP15.5■□□□□ 0.07
CUX1-213ENST00000549414 PFKLP17858 780 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 BMP8BP34820 402 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 SELENOWP63302 87 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 FCHO2Q0JRZ9 810 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 CROCCQ5TZA2 2017 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 BMP8AQ7Z5Y6 402 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 PDZD3Q86UT5 571 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 PHOSPHO1Q8TCT1 267 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 Q9N2J8 555 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 GPR52Q9Y2T5 361 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 NRXN2Q9P2S2 1712 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 A0A1B0GVG6 124 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 AGR2O95994 175 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 IGFALSP35858 605 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 GPR4P46093 362 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 ALG11Q2TAA5 492 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 GALNT12Q8IXK2 581 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 CENPSQ8N2Z9 138 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 ZSWIM3Q96MP5 696 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 MND1Q9BWT6 205 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 KCNN2Q9H2S1 579 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 ZSCAN32Q9NX65 697 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 BTNL2Q9UIR0 455 aa15.5■□□□□ 0.07
CUX1-213ENST00000549414 EP300Q09472 2414 aaPredicted RBP15.5■□□□□ 0.07
CUX1-213ENST00000549414 EMC8O43402 210 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 GJA4P35212 333 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TAS2R38P59533 333 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 SMU1Q2TAY7 513 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TANGO2Q6ICL3 276 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 SHFQ7M4L6 423 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 FAM217AQ8IXS0 508 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 MFSD2AQ8NA29 543 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 OR10H5Q8NGA6 315 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TSEN15Q8WW01 171 aaKnown RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 RLN3Q8WXF3 142 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 LRR1Q96L50 414 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 NAA50Q9GZZ1 169 aaKnown RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 GORASP2Q9H8Y8 452 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 BRF2Q9HAW0 419 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TIGARQ9NQ88 270 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TRPV5Q9NQA5 729 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 BLOC1S5-TXNDC5H3BN57 136 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 PSMA3P25788 255 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 SUOXP51687 545 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 CSTF1Q05048 431 aaKnown RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 ZFP69Q49AA0 526 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 SLC27A4Q6P1M0 643 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 PNCKQ6P2M8 343 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TSPYL5Q86VY4 417 aaPredicted RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 SPPL3Q8TCT6 385 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TBL1XR1Q9BZK7 514 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 NECTIN3Q9NQS3 549 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 CD300AQ9UGN4 299 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 KLF15Q9UIH9 416 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 ERVK-11Q9UQG0 969 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 MICAL3Q7RTP6 2002 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 AKAP8O43823 692 aaKnown RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 SDC3O75056 442 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 HOXC5Q00444 222 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 FLYWCH1Q4VC44 716 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 CPZQ66K79 652 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 METTL2BQ6P1Q9 378 aaKnown RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 MSANTD1Q6ZTZ1 278 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 ASB18Q6ZVZ8 466 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 GPR149Q86SP6 731 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 OR52P1PQ8NH57 321 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 BBS10Q8TAM1 723 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 FAM83CQ9BQN1 747 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 CDADC1Q9BWV3 514 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 NPLQ9BXD5 320 aaPredicted RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 ASPNQ9BXN1 380 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 TMEM121BQ9BXQ6 578 aaPredicted RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 ANKMY1Q9P2S6 941 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 FAM155AB1AL88 458 aaPredicted RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 H3BMQ9 156 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 UBXN7O94888 489 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 GJA8P48165 433 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 LRRC17Q8N6Y2 441 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 COG8Q96MW5 612 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 ZNF300Q96RE9 604 aaPredicted RBP15.49■□□□□ 0.07
CUX1-213ENST00000549414 NLGN3Q9NZ94 848 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 KLHL42Q9P2K6 505 aa15.49■□□□□ 0.07
CUX1-213ENST00000549414 SHC2P98077 582 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 PPP2R2BQ00005 443 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 TAP2Q03519 686 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 HMBOX1Q6NT76 420 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 SERPINA11Q86U17 422 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 CPPED1Q9BRF8 314 aaPredicted RBP15.48■□□□□ 0.07
CUX1-213ENST00000549414 BRD7Q9NPI1 651 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 TM7SF3Q9NS93 570 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 HCN3Q9P1Z3 774 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 C2orf92A0A1B0GVN3 265 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 K7ESM1 405 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 CCRL2O00421 344 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 FAAHO00519 579 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms