RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 OR10G3Q8NGC4 313 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 UCN3Q969E3 161 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 ISL2Q96A47 359 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 TP53INP1Q96A56 240 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 REPS1Q96D71 796 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 WDR34Q96EX3 536 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 DACH2Q96NX9 599 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 TRIB1Q96RU8 372 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 SECISBP2Q96T21 854 aaKnown RBP8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 MAPKAP1Q9BPZ7 522 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 RHOJQ9H4E5 214 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 SH2D2AQ9NP31 389 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 SEMA4BQ9NPR2 832 aaPredicted RBP8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 DLL4Q9NR61 685 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 SLC17A6Q9P2U8 582 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 IKZF3Q9UKT9 509 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 RNF112Q9ULX5 631 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 RPH3AQ9Y2J0 694 aaPredicted RBP8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 PPP2R2CQ9Y2T4 447 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 ANGPTL3Q9Y5C1 460 aa8.38□□□□□ -1.07
AC055716.3-201ENST00000547533 A0A1B0GTL3 188 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 CD8B2A6NJW9 211 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 FGF17O60258 216 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 SCELO95171 688 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ACTL6AO96019 429 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 TGFB1P01137 390 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 RFPL3SP0C7P2 107 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 CCDC166P0CW27 439 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ENDOUP21128 410 aaKnown RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 PGGT1BP53609 377 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 TAS2R39P59534 338 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 HERVK_113P63132 956 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ERVK-8P63133 956 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 IGLV3-21P80748 117 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 PPP2R2BQ00005 443 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 TNFRSF17Q02223 184 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 CRYZQ08257 329 aaKnown RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF460Q14592 562 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 SPRED3Q2MJR0 410 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 KHDRBS2Q5VWX1 349 aaKnown RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 STEAP4Q687X5 459 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ENPP6Q6UWR7 440 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 MYLK4Q86YV6 388 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 OR4N5Q8IXE1 308 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 C9orf40Q8IXQ3 194 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 EXT2Q93063 718 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ABTB1Q969K4 478 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 PIGTQ969N2 578 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ANKRD9Q96BM1 317 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 NTNG2Q96CW9 530 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 OSBPL9Q96SU4 736 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 TIMP4Q99727 224 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 TM9SF2Q99805 663 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 SFXN3Q9BWM7 321 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 RBM24Q9BX46 236 aaKnown RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ERVK-6Q9BXR3 956 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 MS4A8Q9BY19 250 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 WWTR1Q9GZV5 400 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 PRDM14Q9GZV8 571 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 LYARQ9NX58 379 aaKnown RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 OPTCQ9UBM4 332 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF490Q9ULM2 529 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 ERVK-19Q9WJR5 959 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 CHCHD2Q9Y6H1 151 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 TEX264Q9Y6I9 313 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 IKBKGQ9Y6K9 419 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 NSD1Q96L73 2696 aaPredicted RBP8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 EXPH5Q8NEV8 1989 aa8.37□□□□□ -1.07
AC055716.3-201ENST00000547533 LRRC3CA6NJW4 275 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 SYCE1LA8MT33 242 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 RTCAO00442 366 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 SMPD2O60906 423 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 GPR75O95800 540 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 HPNP05981 417 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 HEXAP06865 529 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 TMIGD3P0DMS9 266 aaPredicted RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 NR2F6P10588 404 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 EPB42P16452 691 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 FPR1P21462 350 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PTX3P26022 381 aaPredicted RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PIK3R1P27986 724 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 GALNSP34059 522 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PIK3CBP42338 1070 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 CASP2P42575 452 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 CDK9P50750 372 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF136P52737 540 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 DR1Q01658 176 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PDIA2Q13087 525 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 GAB1Q13480 694 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 DDX39BQ13838 428 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 C18orf21Q32NC0 220 aaPredicted RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 NHSL2Q5HYW2 709 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 TRMT10BQ6PF06 316 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms