RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 STSP08842 583 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 HIST1H1TP22492 207 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 ITGA1P56199 1179 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 NCS1P62166 190 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 REEP5Q00765 189 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 ATP1A4Q13733 1029 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 PUM1Q14671 1186 aaKnown RBP eCLIP12.03□□□□□ -0.482e-8■■■■□ 19.4
SCAF11-209ENST00000547018 NNATQ16517 81 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 KDM4DQ6B0I6 523 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 XAF1Q6GPH4 301 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 RNF165Q6ZSG1 346 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 HDAC2Q92769 488 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 QRFPRQ96P65 431 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 MENTQ9BUN1 341 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 TRPV4Q9HBA0 871 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 DNAAF2Q9NVR5 837 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 GIN1Q9NXP7 522 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 DNAJC27Q9NZQ0 273 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 NPIPB8E9PQR5 432 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 M0R3G1 203 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 ADAMDEC1O15204 470 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 NDUFS2O75306 463 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 UGT2B11O75310 529 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 LIM2P55344 173 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 ILF3Q12906 894 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 MSANTD1Q6ZTZ1 278 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 STX19Q8N4C7 294 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 SETD9Q8NE22 299 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 MS4A6EQ96DS6 147 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 COPS4Q9BT78 406 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 YIPF2Q9BWQ6 316 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 PCBD2Q9H0N5 130 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 OBP2AQ9NY56 170 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 TMEM229AB2RXF0 380 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 HMGN4O00479 90 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 HYAL3O43820 417 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 CYP7B1O75881 506 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 CTSBP07858 339 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 RPL3P39023 403 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 SPCS2Q15005 226 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 FRMPD2BQ6IN97 320 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 ERI1Q8IV48 349 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 ABHD11Q8NFV4 315 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 OR5P2Q8WZ92 322 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 AMDHD1Q96NU7 426 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 CSF3RQ99062 836 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 FAIM2Q9BWQ8 316 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 SERHL2Q9H4I8 314 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 NMNAT1Q9HAN9 279 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 EXOSC4Q9NPD3 245 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 MRPS2Q9Y399 296 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 CPSF4LA6NMK7 179 aaKnown RBP12.02□□□□□ -0.48
SCAF11-209ENST00000547018 RGS10O43665 173 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 CTSVO60911 334 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 HPRP00739 348 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 IFNA14P01570 189 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 CPN2P22792 545 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 ATP5A1P25705 553 aaKnown RBP12.02□□□□□ -0.48
SCAF11-209ENST00000547018 PPP2R1BP30154 601 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 VSX2P58304 361 aaPredicted RBP12.02□□□□□ -0.48
SCAF11-209ENST00000547018 ERV3-1Q14264 604 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF630Q2M218 657 aaPredicted RBP12.02□□□□□ -0.48
SCAF11-209ENST00000547018 SNAP47Q5SQN1 464 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 PTCHD4Q6ZW05 846 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 C16orf62Q7Z3J2 963 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF605Q86T29 641 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 ENTHD1Q8IYW4 607 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 PSD4Q8NDX1 1056 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 OR4D11Q8NGI4 311 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 GEMIN6Q8WXD5 167 aaKnown RBP12.02□□□□□ -0.48
SCAF11-209ENST00000547018 RNF6Q9Y252 685 aa12.02□□□□□ -0.48
SCAF11-209ENST00000547018 PFDN1O60925 122 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 SEMA4FO95754 770 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 C7P10643 843 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 PKLRP30613 574 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 MAGEA2P43356 314 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 CLK1P49759 484 aaKnown RBP12.02□□□□□ -0.49
SCAF11-209ENST00000547018 PSMD7P51665 324 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.49
SCAF11-209ENST00000547018 EPS8Q12929 822 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 HTR4Q13639 388 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 MYBPC3Q14896 1274 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 MAD2L1BPQ15013 274 aaPredicted RBP12.02□□□□□ -0.49
SCAF11-209ENST00000547018 MED22Q15528 200 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 GPR68Q15743 365 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 MAPK11Q15759 364 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 RFX4Q33E94 735 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 IRAK1BP1Q5VVH5 260 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 ABHD17CQ6PCB6 329 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 COMTD1Q86VU5 262 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 CCDC3Q9BQI4 270 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 RSPO3Q9BXY4 272 aaPredicted RBP12.02□□□□□ -0.49
SCAF11-209ENST00000547018 DOLKQ9UPQ8 538 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms