RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 ZNF426Q9BUY5 554 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 KATNB1Q9BVA0 655 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 IPPKQ9H8X2 491 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SSU72Q9NP77 194 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PLSCR3Q9NRY6 295 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 OLAHQ9NV23 265 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 MRPL15Q9P015 296 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 COL20A1Q9P218 1284 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 GHRLQ9UBU3 117 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SERTAD1Q9UHV2 236 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 RWDD2AQ9UIY3 292 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CYP8B1Q9UNU6 501 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 TMEM184BQ9Y519 407 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 HSPB11Q9Y547 144 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 USP42Q9H9J4 1324 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ATRNO75882 1429 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAG1Q86YV5 1406 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ASXL1Q8IXJ9 1541 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 NHSL1Q5SYE7 1610 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 MEX3AA1L020 520 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF22A3QJZ6 481 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF27A3QJZ7 478 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 FABP12A6NFH5 140 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF25A6NGN4 478 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 GLTPD2A6NH11 291 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 AGAP14A8MT82 685 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 C9orf172C9J069 976 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF26H0Y7S4 382 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 H3BNC9 293 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 M0R143 59 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 LGALS8O00214 317 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 TP53I11O14683 189 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ZNF185O15231 689 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 OR10H2O60403 315 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SELENOFO60613 162 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF4O60810 478 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF11O60813 436 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 KHDRBS3O75525 346 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 RGS9O75916 674 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 FADS2O95864 444 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 MT-CO1P00395 513 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ERCC1P07992 297 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ADORA3P0DMS8 318 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 GTF2F2P13984 249 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 HMGB2P26583 209 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 IL12BP29460 328 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SSTR2P30874 369 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 GNRHRP30968 328 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 FMO3P31513 532 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SFNP31947 248 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SHMT2P34897 504 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 IGFALSP35858 605 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PMELP40967 661 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 HTR5AP47898 357 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ACOT2P49753 483 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 EEFSECP57772 596 aaKnown RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CDKL1Q00532 357 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 MYL7Q01449 175 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SLC18A2Q05940 514 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 BAATQ14032 418 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 EXOC3L2Q2M3D2 409 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 Q5BKY6 102 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF5Q5TYX0 476 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 BROXQ5VW32 411 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF9Q5VWM5 478 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF13Q5VWM6 474 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PRAMEF6Q5VXH4 476 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 KLHL17Q6TDP4 642 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SLC46A3Q7Z3Q1 461 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 TRIM46Q7Z4K8 759 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SPATA19Q7Z5L4 167 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CPOQ8IVL8 374 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ZFPM1Q8IX07 1006 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SVBPQ8N300 66 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SFRP1Q8N474 314 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ZNF557Q8N988 423 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 OR6J1Q8NGC5 347 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CSGALNACT1Q8TDX6 532 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CHURC1Q8WUH1 139 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 BRI3BPQ8WY22 251 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 APBB2Q92870 758 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SLC38A4Q969I6 547 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 UBE2FQ969M7 185 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 EEF2KMTQ96G04 330 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SIGLEC10Q96LC7 697 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 MCCC1Q96RQ3 725 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CITED1Q99966 193 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 THAP7Q9BT49 309 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-203ENST00000545354 THTPAQ9BU02 230 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 FICDQ9BVA6 458 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ACTRT3Q9BYD9 372 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 PCED1AQ9H1Q7 454 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 ST6GALNAC4Q9H4F1 302 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 SMOC1Q9H4F8 434 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 FBXO44Q9H4M3 255 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 TPT1P8Q9HAU6 139 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 LPAR2Q9HBW0 351 aa4.91□□□□□ -1.62
UBE4A-203ENST00000545354 CSNK1G1Q9HCP0 422 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms