RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PRAMEF4O60810 478 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 GPC4O75487 556 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ZFAND5O76080 213 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 C1orf105O95561 183 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 AGTP01019 485 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CYP1A2P05177 515 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SLC35G6P0C7Q6 338 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ERGP11308 486 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SRD5A1P18405 259 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 IL1RNP18510 177 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CHRM3P20309 590 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CRYGSP22914 178 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CFPP27918 469 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SLC6A9P48067 706 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 NR0B1P51843 470 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CSE1LP55060 971 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 MTTPP55157 894 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 RPS15AP62244 130 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 RPS4XP62701 263 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 UBXN1Q04323 297 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 HGFACQ04756 655 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 PRDX1Q06830 199 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 KLHL30Q0D2K2 578 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 WASHC5Q12768 1159 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 NFYCQ13952 458 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 TFDP2Q14188 446 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 RCAN2Q14206 197 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 GALEQ14376 348 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SQLEQ14534 574 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ARHGAP19Q14CB8 494 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 HERC3Q15034 1050 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 KRT31Q15323 416 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 PHKG1Q16816 387 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 TYSND1Q2T9J0 566 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ZMAT1Q5H9K5 638 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 UBAP2Q5T6F2 1119 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ICE2Q659A1 982 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF425Q6IV72 752 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 IL20RBQ6UXL0 311 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 RANBP10Q6VN20 620 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 MEX3DQ86XN8 651 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 RFX6Q8HWS3 928 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 GPATCH11Q8N954 259 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CAMKVQ8NCB2 501 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 MAPK1IP1LQ8NDC0 245 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 B3GNT7Q8NFL0 401 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 MBD3L2Q8NHZ7 208 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 STYXQ8WUJ0 223 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SKA2Q8WVK7 121 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 UCN3Q969E3 161 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 KIAA1191Q96A73 305 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 TBC1D20Q96BZ9 403 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SLC7A6OSQ96CW6 309 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 VMP1Q96GC9 406 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 OXNAD1Q96HP4 312 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 LCORQ96JN0 433 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 DNAJC1Q96KC8 554 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CAPZA3Q96KX2 299 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 QRFPRQ96P65 431 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 PANX3Q96QZ0 392 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ERGIC2Q96RQ1 377 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ACAT2Q9BWD1 397 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CARD6Q9BX69 1037 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 GBA3Q9H227 469 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF703Q9H7S9 590 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CALHM2Q9HA72 323 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 LANCL2Q9NS86 450 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 NLE1Q9NVX2 485 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 ING3Q9NXR8 418 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CHMP5Q9NZZ3 219 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 C6orf203Q9P0P8 240 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SPRR3Q9UBC9 169 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CIDEBQ9UHD4 219 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 TTC7AQ9ULT0 858 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 BOKQ9UMX3 212 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 PCDHA13Q9Y5I0 950 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SLC22A7Q9Y694 548 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 PRSS21Q9Y6M0 314 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 DOCK10Q96BY6 2186 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CHD3Q12873 2000 aaKnown RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 NBEAL1Q6ZS30 2694 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 CUBNO60494 3623 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 RTTNQ86VV8 2226 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 KCNE1BA0A087WTH5 132 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 C15orf38-AP3S2A0A0A6YYH1 394 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 IGKV1-8A0A0C4DH67 115 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OR2W5A6NFC9 320 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 MROH6A6NGR9 719 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 C3orf70A6NLC5 250 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 LRRC53A6NM62 1247 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 LGALS16A8MUM7 142 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 HACD1B0YJ81 288 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 G3V3Y1 287 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 PSMD12O00232 456 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-220ENST00000544550 HAT1O14929 419 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 AVILO75366 819 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 RDH16O75452 317 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 TUSC2O75896 110 aa3.73□□□□□ -1.81
SNHG1-220ENST00000544550 OR2J2O76002 312 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms