RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TGFAP01135 160 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 GNB3P16520 340 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ACKR3P25106 362 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 AKT2P31751 481 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 HERV-K104P63124 156 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 GRB14Q14449 540 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ATP1A1-AS1Q5TC04 95 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CD164L2Q6UWJ8 174 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 MEX3BQ6ZN04 569 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 NBPF5PQ86XG9 351 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 SLC43A2Q8N370 569 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CNNM3Q8NE01 707 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM186Q96B77 213 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 SLCO4A1Q96BD0 722 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 C16orf58Q96GQ5 468 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 PKNOX2Q96KN3 472 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CFAP53Q96M91 514 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 UHRF2Q96PU4 802 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ERGIC2Q96RQ1 377 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 IL12RB2Q99665 862 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 INTS10Q9NVR2 710 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ACTR3BQ9P1U1 418 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 KCNN3Q9UGI6 736 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 IGHV4-4A0A075B6R2 117 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ATP6AP2A0A1C7CYW4 349 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ANHXE9PGG2 379 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 BLOC1S5-TXNDC5H3BN57 136 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 P2RX6O15547 441 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 TXNL1O43396 289 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 VTNP04004 478 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 UMODP07911 640 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ZCCHC18P0CG32 403 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CYP3A5P20815 502 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 AADACP22760 399 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CHRNB4P30926 498 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CAMLGP49069 296 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 KRTAP10-9P60411 292 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 HNRNPDQ14103 355 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 MTF1Q14872 753 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CCDC40Q4G0X9 1142 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 C9orf50Q5SZB4 431 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 SNRNP48Q6IEG0 339 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 NEK5Q6P3R8 708 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 PSRC1Q6PGN9 363 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 HOGA1Q86XE5 327 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF444Q8N0Y2 327 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 OR5AP2Q8NGF4 316 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 OR4L1Q8NH43 312 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CHURC1Q8WUH1 139 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CASP10Q92851 521 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 MRPL38Q96DV4 380 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 OMA1Q96E52 524 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF274Q96GC6 653 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 SAMD8Q96LT4 415 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 PGLYRP2Q96PD5 576 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 TDRD1Q9BXT4 1180 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 DDX28Q9NUL7 540 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 PLEK2Q9NYT0 353 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 CCPG1Q9ULG6 757 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 PROCRQ9UNN8 238 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 WDR37Q9Y2I8 494 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ABCC4O15439 1325 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 OTOFQ9HC10 1997 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 A0A0U1RRA0 63 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 ERVV-1B6SEH8 477 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 SLC1A7O00341 560 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 OGTO15294 1046 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 SIGLEC5O15389 551 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 PCDH7O60245 1069 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 MAGEC1O60732 1142 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 OR6B1O95007 311 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 CLDN1O95832 211 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 PDGFBP01127 241 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-207ENST00000544052 PGK2P07205 417 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF18P17022 549 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 ACP1P24666 158 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 CALRP27797 417 aaKnown RBP3.22□□□□□ -1.89
SCFD1-207ENST00000544052 NSFP46459 744 aaKnown RBP3.22□□□□□ -1.89
SCFD1-207ENST00000544052 GAMTQ14353 236 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 EFTUD2Q15029 972 aaKnown RBP eCLIP3.22□□□□□ -1.891e-6■■□□□ 14.4
SCFD1-207ENST00000544052 FAM106AQ4KMX7 169 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 SPANXN4Q5MJ08 99 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 MACC1Q6ZN28 852 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 Q6ZSR9 355 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 RFPL4BQ6ZWI9 263 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 WDR49Q8IV35 697 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 CCDC185Q8N715 623 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 GLYATL1Q969I3 302 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 NSMCE2Q96MF7 247 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 PCDHB18PQ96TA0 734 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 FUCA2Q9BTY2 467 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 NUSAP1Q9BXS6 441 aaKnown RBP3.22□□□□□ -1.89
SCFD1-207ENST00000544052 SIRPDQ9H106 197 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF319Q9P2F9 582 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 COPS7AQ9UBW8 275 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 ICAM5Q9UMF0 924 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 ERVK-19Q9WJR5 959 aa3.22□□□□□ -1.89
SCFD1-207ENST00000544052 SELENOKQ9Y6D0 94 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms