RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 DUSP2Q05923 314 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 EXT1Q16394 746 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 PLAG1Q6DJT9 500 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 CGB2Q6NT52 195 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 KBTBD2Q8IY47 623 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 SAMD14Q8IZD0 417 aaPredicted RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 FAM9CQ8IZT9 166 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 GALNT16Q8N428 558 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 NFAM1Q8NET5 270 aaPredicted RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 DOK4Q8TEW6 326 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 DAZLQ92904 295 aaKnown RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 RIT1Q92963 219 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 MTERF3Q96E29 417 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 CHMP6Q96FZ7 201 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 THOC3Q96J01 351 aaKnown RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 BBS4Q96RK4 519 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 CCDC28BQ9BUN5 200 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 DPY30Q9C005 99 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 KCNK13Q9HB14 408 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 SH3BP4Q9P0V3 963 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 ATP6V1HQ9UI12 483 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 A6NL46 340 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 MYO1GB0I1T2 1018 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 ANKRD28O15084 1053 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 DYRK3O43781 588 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 ATP1B1P05026 303 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 SERPINA7P05543 415 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 ICAM2P13598 275 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 IDO1P14902 403 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 NT5EP21589 574 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 NTSP30990 170 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 LSP1P33241 339 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 GALNSP34059 522 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 PTGER1P34995 402 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 RPL3P39023 403 aaKnown RBP12.71□□□□□ -0.37
SP140-213ENST00000543928 NME5P56597 212 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 C21orf58P58505 322 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 GNGT1P63211 74 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.37
SP140-213ENST00000543928 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 CEBPEQ15744 281 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 SPRED3Q2MJR0 410 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 ZNF385BQ569K4 471 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 GALNT12Q8IXK2 581 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 RIMKLAQ8IXN7 391 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 CCDC116Q8IYX3 515 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 MORN4Q8NDC4 146 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 B3GNT7Q8NFL0 401 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 OR7A2PQ8NGA2 310 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 M1APQ8TC57 530 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 SLC2A12Q8TD20 617 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 NUDT8Q8WV74 236 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 STON2Q8WXE9 905 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 CIDECQ96AQ7 238 aaPredicted RBP12.71□□□□□ -0.37
SP140-213ENST00000543928 CNPPD1Q9BV87 410 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 TMEM120AQ9BXJ8 343 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 BRINP2Q9C0B6 783 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 OR8D2Q9GZM6 311 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 CXorf21Q9HAI6 301 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 MMP25Q9NPA2 562 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 PPIEQ9UNP9 301 aaKnown RBP12.71□□□□□ -0.37
SP140-213ENST00000543928 MAPRE3Q9UPY8 281 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 GPR45Q9Y5Y3 372 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
SP140-213ENST00000543928 HRKO00198 91 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 PDPK1O15530 556 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 DDAH2O95865 285 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 ITGAMP11215 1152 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 LAMP1P11279 417 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 PCSK2P16519 638 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 DDX5P17844 614 aaKnown RBP12.7□□□□□ -0.38
SP140-213ENST00000543928 GPR143P51810 404 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 NCBP2P52298 156 aaKnown RBP eCLIP12.7□□□□□ -0.38
SP140-213ENST00000543928 SEC24CP53992 1094 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 POLE2P56282 527 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 SOX8P57073 446 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 UFM1P61960 85 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 AP2B1P63010 937 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 RHDQ02161 417 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 RAPSNQ13702 412 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 ZNF267Q14586 743 aaPredicted RBP12.7□□□□□ -0.38
SP140-213ENST00000543928 LTB4RQ15722 352 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 GSTA3Q16772 222 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 MPEG1Q2M385 716 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 LINC00303Q3SY05 128 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 PDCD4Q53EL6 469 aaKnown RBP12.7□□□□□ -0.38
SP140-213ENST00000543928 C6orf163Q5TEZ5 329 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 IRAK1BP1Q5VVH5 260 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 KIF2BQ8N4N8 673 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 ZNF321PQ8N8H1 164 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 APCDD1LQ8NCL9 501 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 ADCY4Q8NFM4 1077 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 SUN3Q8TAQ9 357 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 ELP5Q8TE02 316 aa12.7□□□□□ -0.38
SP140-213ENST00000543928 TTC9Q92623 222 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms