RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ZNF250P15622 560 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 CD22P20273 847 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 ERP29P30040 261 aaKnown RBP8.68□□□□□ -1.02
THBS3-211ENST00000541990 RECQLP46063 649 aaPredicted RBP8.68□□□□□ -1.02
THBS3-211ENST00000541990 CACNG1Q06432 222 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 FCHO2Q0JRZ9 810 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 RUNX3Q13761 415 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 RGNQ15493 299 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 ATP13A5Q4VNC0 1218 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 KIAA1211LQ6NV74 962 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 HSD11B1LQ7Z5J1 315 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
THBS3-211ENST00000541990 TIGD4Q8IY51 512 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 ZBTB2Q8N680 514 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 LILRA3Q8N6C8 439 aaPredicted RBP8.68□□□□□ -1.02
THBS3-211ENST00000541990 FRMD1Q8N878 549 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 FAM181AQ8N9Y4 354 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 LSM14AQ8ND56 463 aaKnown RBP8.68□□□□□ -1.02
THBS3-211ENST00000541990 DNAJB8Q8NHS0 232 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 CREB3L4Q8TEY5 395 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 NACC2Q96BF6 587 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 NRTNQ99748 197 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 SERGEFQ9UGK8 458 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 HS3ST2Q9Y278 367 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 PCDHB11Q9Y5F2 797 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 SNX11Q9Y5W9 270 aa8.68□□□□□ -1.02
THBS3-211ENST00000541990 SLC35F4A4IF30 521 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 GTPBP1O00178 669 aaKnown RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 TPST2O60704 377 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 TNFRSF21O75509 655 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 RPS3P23396 243 aaKnown RBP eCLIP8.67□□□□□ -1.02
THBS3-211ENST00000541990 SERPINA4P29622 427 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 CRATP43155 626 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 RGS4P49798 205 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 MAPK12P53778 367 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 MPP7Q5T2T1 576 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 PDZK1Q5T2W1 519 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 GPRC6AQ5T6X5 926 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ERICH5Q6P6B1 374 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ETFBKMTQ8IXQ9 262 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 CPA6Q8N4T0 437 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 BMPERQ8N8U9 685 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.67□□□□□ -1.02
THBS3-211ENST00000541990 ATG10Q9H0Y0 220 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 SLC22A14Q9Y267 594 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 C1orf226A1L170 272 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 OR2AG2A6NM03 316 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 H7C0S8 307 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ADAMDEC1O15204 470 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 LATS1O95835 1130 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 RECKO95980 971 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ZNF30P17039 623 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 CSTF2P33240 577 aaKnown RBP eCLIP8.67□□□□□ -1.02
THBS3-211ENST00000541990 SDC2P34741 201 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 SELENOWP63302 87 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 SPHARQ15513 63 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 HKDC1Q2TB90 917 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 TOR1AIP1Q5JTV8 583 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 FAM180BQ6P0A1 224 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 VRK3Q8IV63 474 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 FBXL6Q8N531 539 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 IQCF1Q8N6M8 205 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 OR4K1Q8NGD4 311 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 OR5AK3PQ8NH89 298 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 NFKBIDQ8NI38 313 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 C9orf43Q8TAL5 461 aaPredicted RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 UBTD2Q8WUN7 234 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 BTN2A2Q8WVV5 523 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 SLC25A46Q96AG3 418 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 CMTM7Q96FZ5 175 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 SLC29A3Q9BZD2 475 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 POLR2J2Q9GZM3 115 aaKnown RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 ACER3Q9NUN7 267 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 TXNL4BQ9NX01 149 aaKnown RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 IQCMA0A1B0GVH7 501 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 HYKKA2RU49 373 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ZAR1LA6NP61 321 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 WASHC1A8K0Z3 465 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 MMP20O60882 483 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 NCR1O76036 304 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 KAT7O95251 611 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ADH1CP00326 375 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 C1QBP02746 253 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 GBAP04062 536 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 HOXB6P17509 224 aaKnown RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 DDX5P17844 614 aaKnown RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 DGKAP23743 735 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 DDX6P26196 483 aaKnown RBP eCLIP8.67□□□□□ -1.02
THBS3-211ENST00000541990 MAP2K3P46734 347 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 RPIAP49247 311 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 AGFG1P52594 562 aaKnown RBP8.67□□□□□ -1.02
THBS3-211ENST00000541990 MVDP53602 400 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 RUNX1T1Q06455 604 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 TNK1Q13470 666 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 VEZF1Q14119 521 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 LRRC32Q14392 662 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ZNF385BQ569K4 471 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 ESCO2Q56NI9 601 aa8.67□□□□□ -1.02
THBS3-211ENST00000541990 PLET1Q6UQ28 207 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms