RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ASPNQ9BXN1 380 aa5□□□□□ -1.61
PROM1-220ENST00000540805 TPSD1Q9BZJ3 242 aa5□□□□□ -1.61
PROM1-220ENST00000540805 SRRQ9GZT4 340 aa5□□□□□ -1.61
PROM1-220ENST00000540805 SERHLQ9NQF3 203 aa5□□□□□ -1.61
PROM1-220ENST00000540805 ZC4H2Q9NQZ6 224 aa5□□□□□ -1.61
PROM1-220ENST00000540805 FARSBQ9NSD9 589 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 ZNF451Q9Y4E5 1061 aa5□□□□□ -1.61
PROM1-220ENST00000540805 DENND4CQ5VZ89 1909 aa5□□□□□ -1.61
PROM1-220ENST00000540805 ARID1AO14497 2285 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 GNSP15586 552 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 AKT2P31751 481 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 SLC14A1Q13336 389 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ASAH1Q13510 395 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 NFE2L1Q14494 772 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ZNHIT3Q15649 155 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 FAM131AQ6UXB0 335 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TMEM173Q86WV6 379 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 TMC8Q8IU68 726 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TCTE3Q8IZS6 198 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 FAM9CQ8IZT9 166 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TTC9BQ8N6N2 239 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 OR6C4Q8NGE1 309 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ENKURQ8TC29 256 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 SLC9A6Q92581 669 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 C12orf66Q96MD2 445 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 OR5M11Q96RB7 305 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TTLL2Q9BWV7 592 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 VN1R3Q9BXE9 311 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PRO3102Q9H379 93 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 RNF121Q9H920 327 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MARCH5Q9NX47 278 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 GPRC5BQ9NZH0 403 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CA14Q9ULX7 337 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 KCNK6Q9Y257 313 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CMAHPQ9Y471 501 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 GPR179Q6PRD1 2367 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ARPC4-TTLL3A0A0A6YYG9 625 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 GFRA2O00451 464 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MANBAO00462 879 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PI15O43692 258 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MMP20O60882 483 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 OAZ2O95190 189 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ALPPP05187 535 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PRPS2P11908 318 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TYRP14679 529 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 HOXB9P17482 250 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 SSTR2P30874 369 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 BUD31P41223 144 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 RPIAP49247 311 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 RORCP51449 518 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CLCN4P51793 760 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MAP2K6P52564 334 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 AP2S1P53680 142 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 CASP9P55211 416 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CLDN8P56748 225 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PSPHP78330 225 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TAF1AQ15573 450 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 ZNF79Q15937 498 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ESCO2Q56NI9 601 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 FAM209BQ5JX69 171 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 RNF165Q6ZSG1 346 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ZNF551Q7Z340 670 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 LAX1Q8IWV1 398 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 RDH10Q8IZV5 341 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 DENND6BQ8NEG7 585 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 WDR36Q8NI36 951 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 IRF7Q92985 503 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 EXOSC8Q96B26 276 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 TESCQ96BS2 214 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 MYEOVQ96EZ4 313 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 WDFY2Q96P53 400 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CASD1Q96PB1 797 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PANX1Q96RD7 426 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 FAM129BQ96TA1 746 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 DPYSL5Q9BPU6 564 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.99□□□□□ -1.61
PROM1-220ENST00000540805 NKX2-4Q9H2Z4 354 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 NIPAL2Q9H841 368 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TRPS1Q9UHF7 1281 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 GPN3Q9UHW5 284 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 ATPIF1Q9UII2 106 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 FBXW2Q9UKT8 454 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 DIMT1Q9UNQ2 313 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 POFUT2Q9Y2G5 429 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PCDHGB3Q9Y5G1 929 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 NINQ8N4C6 2090 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 DIDO1Q9BTC0 2240 aaKnown RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 TRBV23-1A0A0A0MS06 115 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 B4DXG7 233 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 LGALS8O00214 317 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 CLIC1O00299 241 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TNFRSF11BO00300 401 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 FPGTO14772 594 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 PLD2O14939 933 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 INSIG1O15503 277 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 OR1F1O43749 312 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 DPM1O60762 260 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 ATG13O75143 517 aa4.99□□□□□ -1.61
PROM1-220ENST00000540805 TRIM3O75382 744 aaPredicted RBP4.99□□□□□ -1.61
PROM1-220ENST00000540805 GPX5O75715 221 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms