RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 UGT2B28Q9BY64 529 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 EPB41L1Q9H4G0 881 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 COQ10BQ9H8M1 238 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 GIMAP4Q9NUV9 329 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 A0A1W2PQM1 296 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 TMEM229AB2RXF0 380 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 H3BMH7 237 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 OPN1SWP03999 348 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 BMP2P12643 396 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 HOXD12P35452 270 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 PRR23CQ6ZRP0 262 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 TTC29Q8NA56 475 aaPredicted RBP23.08■■□□□ 1.29
TTC3-225ENST00000540756 TBC1D20Q96BZ9 403 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 PYURFQ96I23 114 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 CHRNA10Q9GZZ6 450 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 TMEM38AQ9H6F2 299 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 OLAHQ9NV23 265 aa23.08■■□□□ 1.29
TTC3-225ENST00000540756 CFAP54Q96N23 3096 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 FAM86C2PA6NEL3 165 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 TMEM150CB9EJG8 249 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 PDLIM1O00151 329 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 HMGN4O00479 90 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 TXNDC9O14530 226 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 PEX1O43933 1283 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 SOX18P35713 384 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 CDK6Q00534 326 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 MAP7Q14244 749 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 WDR74Q6RFH5 385 aaPredicted RBP23.08■■□□□ 1.28
TTC3-225ENST00000540756 EPHX4Q8IUS5 362 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 SLC44A2Q8IWA5 706 aaPredicted RBP23.08■■□□□ 1.28
TTC3-225ENST00000540756 ELP4Q96EB1 424 aa23.08■■□□□ 1.28
TTC3-225ENST00000540756 OR2W5A6NFC9 320 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 ZNF26P17031 533 aaPredicted RBP23.07■■□□□ 1.28
TTC3-225ENST00000540756 ARL4DP49703 201 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 CCL7P80098 99 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 ERV3-1Q14264 604 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 MAPK11Q15759 364 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 ATP6AP1Q15904 470 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 NRF1Q16656 503 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 RPS26P11Q5JNZ5 115 aaPredicted RBP23.07■■□□□ 1.28
TTC3-225ENST00000540756 LRRC25Q8N386 305 aaPredicted RBP23.07■■□□□ 1.28
TTC3-225ENST00000540756 C16orf58Q96GQ5 468 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 ARRDC1-AS1Q9H2J1 176 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 RAD21L1Q9H4I0 556 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 SEMA3GQ9NS98 782 aa23.07■■□□□ 1.28
TTC3-225ENST00000540756 PRAMEF27A3QJZ7 478 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 EME2A4GXA9 379 aaPredicted RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 CDC123O75794 336 aaPredicted RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 OR12D1P0DN82 309 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 ARAFP10398 606 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 ANKFN1Q8N957 763 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 OR7G2Q8NG99 324 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SLC38A5Q8WUX1 472 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 CENPNQ96H22 339 aaPredicted RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 PEX11GQ96HA9 241 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 OR51I1Q9H343 314 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 NTN4Q9HB63 628 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 ASCC3Q8N3C0 2202 aaKnown RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 ADAMTS20P59510 1910 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SOCS2O14508 198 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 HMGN2P05204 90 aaKnown RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 RPSAP08865 295 aaKnown RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 CPMP14384 443 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 RAB38P57729 211 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 LASP1Q14847 261 aaKnown RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 CBLL1Q75N03 491 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 OLIG3Q7RTU3 272 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 WDR53Q7Z5U6 358 aaPredicted RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 D2HGDHQ8N465 521 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 FAM181AQ8N9Y4 354 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 OR1L3Q8NH93 324 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 MMABQ96EY8 250 aaPredicted RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 TPD52L3Q96J77 140 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SLC41A2Q96JW4 573 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SLC35G5Q96KT7 338 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 NPLQ9BXD5 320 aaPredicted RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 VCX3BQ9H321 246 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 EQTNQ9NQ60 294 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SEMA5BQ9P283 1151 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 OAZ3Q9UMX2 235 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SAMD4AQ9UPU9 718 aaKnown RBP23.06■■□□□ 1.28
TTC3-225ENST00000540756 MAU2Q9Y6X3 613 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 R4GN57 208 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 SPACA6W5XKT8 324 aa23.06■■□□□ 1.28
TTC3-225ENST00000540756 RPLP0P05388 317 aaKnown RBP23.05■■□□□ 1.28
TTC3-225ENST00000540756 FAM53BQ14153 422 aa23.05■■□□□ 1.28
TTC3-225ENST00000540756 FAM111BQ6SJ93 734 aa23.05■■□□□ 1.28
TTC3-225ENST00000540756 RCBTB1Q8NDN9 531 aa23.05■■□□□ 1.28
TTC3-225ENST00000540756 ANKRD9Q96BM1 317 aaPredicted RBP23.05■■□□□ 1.28
TTC3-225ENST00000540756 TAMM41Q96BW9 452 aa23.05■■□□□ 1.28
TTC3-225ENST00000540756 HSH2DQ96JZ2 352 aa23.05■■□□□ 1.28
TTC3-225ENST00000540756 FITM1A5D6W6 292 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 UPK1AO00322 258 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 CLOCKO15516 846 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 OR2B3O76000 313 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 CER1O95813 267 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 BCHEP06276 602 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 PNLIPP16233 465 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 MATN1P21941 496 aa23.04■■□□□ 1.28
TTC3-225ENST00000540756 IST1P53990 364 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms