RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 LIX1LQ8IVB5 337 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 LRRC25Q8N386 305 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 OR10G3Q8NGC4 313 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 OR10Q1Q8NGQ4 319 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 DOK4Q8TEW6 326 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 GAL3ST4Q96RP7 486 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF559Q9BR84 538 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 WWTR1Q9GZV5 400 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 RAB17Q9H0T7 212 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 LDAHQ9H6V9 325 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 PROK2Q9HC23 129 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ZFP64Q9NPA5 681 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 LYARQ9NX58 379 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ACAD8Q9UKU7 415 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 BOKQ9UMX3 212 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ERVK-19Q9WJR5 959 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ASB4Q9Y574 426 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ANGPTL3Q9Y5C1 460 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 PCDHGA11Q9Y5H2 935 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 SPG11Q96JI7 2443 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF469Q96JG9 3925 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 IQANK1A0A1B0GTG1 560 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 A0A1W2PR48 441 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 HMX2A2RU54 273 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 LRRC14BA6NHZ5 514 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 GLOD5A6NK44 160 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 WASHC1A8K0Z3 465 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 UGDHO60701 494 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 GPR75O95800 540 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 AIFM1O95831 613 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 C2P06681 752 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 GFAPP14136 432 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 PTX3P26022 381 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 BSGP35613 385 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 ALDH18A1P54886 795 aaKnown RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 SLC37A1P57057 533 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 PHEXP78562 749 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 GUCY2DQ02846 1103 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 CUL3Q13618 768 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 ACAP2Q15057 778 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 PFKFB4Q16877 469 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 FAM83EQ2M2I3 478 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 SLC29A4Q7RTT9 530 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 TMEM200AQ86VY9 491 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 NUDT13Q86X67 352 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 CLYBLQ8N0X4 340 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 WDR20Q8TBZ3 569 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 REPS1Q96D71 796 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 EXO5Q9H790 373 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 DDX31Q9H8H2 851 aaKnown RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 SNX15Q9NRS6 342 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 RYDENQ9NUL5 291 aaKnown RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 QPCTLQ9NXS2 382 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 CNIH4Q9P003 139 aa11.51□□□□□ -0.57
VAMP1-206ENST00000538970 CNOT11Q9UKZ1 510 aaKnown RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
VAMP1-206ENST00000538970 OR6C76A6NM76 312 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 FAM47E-STBD1D6RA91 191 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 OR10H2O60403 315 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 KLHL2O95198 593 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 LRATO95237 230 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 FAM58BPP0C7Q3 252 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 GABRA1P14867 456 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 SERPINB3P29508 390 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 GALNSP34059 522 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 PIK3CGP48736 1102 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 DLX5P56178 289 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 MYBPHQ13203 477 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 GTF2H2Q13888 395 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 NTRK2Q16620 822 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
VAMP1-206ENST00000538970 SLC25A35Q3KQZ1 300 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 RIPPLY2Q5TAB7 128 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 MROH9Q5TGP6 573 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 CES4AQ5XG92 561 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 GTF2H2CQ6P1K8 395 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 CYP20A1Q6UW02 462 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 L3MBTL4Q8NA19 623 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 MYRIPQ8NFW9 859 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 NEIL3Q8TAT5 605 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 RIT1Q92963 219 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 GPR78Q96P69 363 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 DOHHQ9BU89 302 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 SLC6A15Q9H2J7 730 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 IPPKQ9H8X2 491 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 WDR41Q9HAD4 459 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 ACKR4Q9NPB9 350 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms