RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 AKAP14Q86UN6 197 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PDZD3Q86UT5 571 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 C11orf74Q86VG3 221 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SNTG1Q9NSN8 517 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SEC14L3Q9UDX4 400 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 WDR37Q9Y2I8 494 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 TRPM6Q9BX84 2022 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 LOC110117498-PIK3R3F6TDL0 507 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 OR1F1O43749 312 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 PRKYO43930 277 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 NTN1O95631 604 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 PCCBP05166 539 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 KELP23276 732 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 GJA8P48165 433 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CCT3P49368 545 aaKnown RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 PRKAG1P54619 331 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF91Q05481 1191 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 ILKQ13418 452 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 UBE3DQ7Z6J8 389 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 AMZ2Q86W34 360 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 HCAR2Q8TDS4 363 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 SMPDL3AQ92484 453 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TXNDC15Q96J42 360 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 LINC00615Q96LM1 132 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TRNT1Q96Q11 434 aaKnown RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 GPA33Q99795 319 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TSSK6Q9BXA6 273 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 FZD3Q9NPG1 666 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 FBXL12Q9NXK8 326 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 AHSPQ9NZD4 102 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CFL2Q9Y281 166 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 A0A0C4DFX4 3053 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 NUP210Q8TEM1 1887 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 C17orf113A0A1B0GUU1 675 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 SMIM30A4D0T7 59 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CAPN5O15484 640 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TLX2O43763 284 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 MPZL2O60487 215 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 PTTG1O95997 202 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TP53P04637 393 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 SCG5P05408 212 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 AZGP1P25311 298 aaKnown RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 KCNJ5P48544 419 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 SPHARQ15513 63 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF750Q32MQ0 723 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 LIPKQ5VXJ0 399 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 SLX4IPQ5VYV7 408 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CASP12Q6UXS9 341 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 ADCK2Q7Z695 626 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 DCUN1D3Q8IWE4 304 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 SLC7A5P1Q8MH63 180 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 OR8H2Q8N162 312 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 GPR151Q8TDV0 419 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TMEM203Q969S6 136 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CEP19Q96LK0 163 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF354BQ96LW1 612 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 XKR8Q9H6D3 395 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 MARCH7Q9H992 704 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CXXC1Q9P0U4 656 aaPredicted RBP11.33□□□□□ -0.6
CPNE8-203ENST00000538596 TRPC4Q9UBN4 977 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 CARD8Q9Y2G2 431 aa11.33□□□□□ -0.6
CPNE8-203ENST00000538596 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 CSTF2P33240 577 aaKnown RBP eCLIP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 CRYBB2P43320 205 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 HEPACAMQ14CZ8 416 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 HNRNPA1L2Q32P51 320 aaKnown RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 PODNL1Q6PEZ8 512 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 KLHL6Q8WZ60 621 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 OR8D1Q8WZ84 308 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 TMEM80Q96HE8 168 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 TEFMQ96QE5 360 aaKnown RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 C17orf62Q9BQA9 187 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 SLC30A2Q9BRI3 323 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 AICDAQ9GZX7 198 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 OR51I1Q9H343 314 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 ENOPH1Q9UHY7 261 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 MUTYHQ9UIF7 546 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 A4GNTQ9UNA3 340 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 GPR34Q9UPC5 381 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 TSC22D4Q9Y3Q8 395 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 A0A1W2PS29 197 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 AP3D1O14617 1153 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 TIMP1P01033 207 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 CASP3P42574 277 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 SNRPGP62308 76 aaKnown RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 GPR19Q15760 415 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF362Q5T0B9 420 aaPredicted RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 C12orf73Q69YU5 71 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms