RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 GYG2O15488 501 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 KLK3P07288 261 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 KRT16P08779 473 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 PORP16435 677 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 AGXTP21549 392 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 PTPN4P29074 926 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 SLC5A2P31639 672 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 SOAT1P35610 550 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 CASP9P55211 416 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 HSD17B7P56937 341 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 MTPNP58546 118 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 MRPS35P82673 323 aaKnown RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 MRPL14Q6P1L8 145 aaKnown RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 TMEM107Q6UX40 140 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 C6orf15Q6UXA7 325 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 ZNF517Q6ZMY9 492 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 LANCL3Q6ZV70 420 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 ASRGL1Q7L266 308 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 C10orf111Q8N326 155 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 GALNT15Q8N3T1 639 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 VPS37AQ8NEZ2 397 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 PNPT1Q8TCS8 783 aaKnown RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 ROPN1LQ96C74 230 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 MAGED4Q96JG8 741 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 SLC46A1Q96NT5 459 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 SPSB2Q99619 263 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 CGREF1Q99674 301 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 BTBD10Q9BSF8 475 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 CADM1Q9BY67 442 aaKnown RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 ALOXE3Q9BYJ1 711 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 TGIF2Q9GZN2 237 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 LRMDAQ9H2I8 198 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 ACSS1Q9NUB1 689 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 GIMAP4Q9NUV9 329 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 TAS2R9Q9NYW1 312 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 CROTQ9UKG9 612 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 PCDHGA8Q9Y5G5 932 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 SEC16AO15027 2179 aa14.67□□□□□ -0.06
SFSWAP-206ENST00000537582 IGKV3D-11A0A0A0MRZ8 115 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 VSTM2BA6NLU5 285 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 ATP5HO75947 161 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 SORBS2O94875 1100 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 ANP32DO95626 131 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 CT62P0C5K7 136 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 SPINK2P20155 84 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 SLC6A2P23975 617 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 MC3RP41968 323 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 TRPC1P48995 793 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 IGLV3-21P80748 117 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 OCA2Q04671 838 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 STX4Q12846 297 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 TMEM164Q5U3C3 297 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 NANOGP8Q6NSW7 305 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 FAM111BQ6SJ93 734 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 HACD2Q6Y1H2 254 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 RNF148Q8N7C7 305 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 GOT1L1Q8NHS2 421 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 CPPED1Q9BRF8 314 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 NANOGQ9H9S0 305 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 GID8Q9NWU2 228 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 CMTM6Q9NX76 183 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 NUP210LQ5VU65 1888 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 CROCCQ5TZA2 2017 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 SDK2Q58EX2 2172 aa14.66□□□□□ -0.06
SFSWAP-206ENST00000537582 A8MUA0 341 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 HRKO00198 91 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 NVLO15381 856 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 ERN1O75460 977 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 NT5EP21589 574 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 MPIP34949 423 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 GPC1P35052 558 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 SLC7A2P52569 658 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 KCNJ2P63252 427 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 FOXC1Q12948 553 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 CAMK2BQ13554 666 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 MLC1Q15049 377 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 NCF4Q15080 339 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 RUNDC3AQ59EK9 446 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 QSOX2Q6ZRP7 698 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 MED25Q71SY5 747 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 PGAM4Q8N0Y7 254 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 OR7G2Q8NG99 324 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 CT55Q8WUE5 264 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 UTP4Q969X6 686 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 TMEM125Q96AQ2 219 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 FKBP10Q96AY3 582 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 ANKRD27Q96NW4 1050 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 C1orf21Q9H246 121 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 SLC26A1Q9H2B4 701 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 ASCL3Q9NQ33 180 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 VPS4AQ9UN37 437 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 PCDHGB4Q9UN71 923 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 USP22Q9UPT9 525 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 MMACHCQ9Y4U1 282 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 KNTC1P50748 2209 aa14.65□□□□□ -0.06
SFSWAP-206ENST00000537582 IGHV3-20A0A0C4DH32 117 aa14.64□□□□□ -0.07
SFSWAP-206ENST00000537582 BLACEA4D250 179 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms