RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 TCEA2Q15560 299 aa12.21□□□□□ -0.45
TRIM25-202ENST00000537230 C7orf61Q8IZ16 206 aa12.21□□□□□ -0.45
TRIM25-202ENST00000537230 MYDGFQ969H8 173 aa12.21□□□□□ -0.45
TRIM25-202ENST00000537230 OTUB1Q96FW1 271 aaPredicted RBP12.21□□□□□ -0.45
TRIM25-202ENST00000537230 ERVK13-1Q9NX77 482 aa12.21□□□□□ -0.45
TRIM25-202ENST00000537230 FBXL12Q9NXK8 326 aa12.21□□□□□ -0.45
TRIM25-202ENST00000537230 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
TRIM25-202ENST00000537230 SCN2AQ99250 2005 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 A0A1W2PP55 124 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 CTDSP2O14595 271 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 SERPIND1P05546 499 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 SOX9P48436 509 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 RGS6P49758 472 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 MANFP55145 182 aaKnown RBP12.21□□□□□ -0.46
TRIM25-202ENST00000537230 RBBP4Q09028 425 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 ST3GAL4Q11206 333 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 PDGFRLQ15198 375 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 ZNF630Q2M218 657 aaPredicted RBP12.21□□□□□ -0.46
TRIM25-202ENST00000537230 HMGN2P46Q86SG4 172 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 RBM45Q8IUH3 476 aaKnown RBP12.21□□□□□ -0.46
TRIM25-202ENST00000537230 STX19Q8N4C7 294 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 PHOSPHO2Q8TCD6 241 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 UBE2E3Q969T4 207 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 MTERF3Q96E29 417 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 INSM2Q96T92 566 aaPredicted RBP12.21□□□□□ -0.46
TRIM25-202ENST00000537230 NUAK2Q9H093 628 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 RHBGQ9H310 441 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 EHD3Q9NZN3 535 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 KCNK6Q9Y257 313 aa12.21□□□□□ -0.46
TRIM25-202ENST00000537230 OR52A4PA6NMU1 304 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 OR1F1O43749 312 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 ADRA2AP08913 450 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 CD72P21854 359 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 LIMS1P48059 325 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 CSNK2BP67870 215 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 IKBIPQ70UQ0 350 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 ADCK2Q7Z695 626 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 LSRQ86X29 649 aaPredicted RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 IL17RDQ8NFM7 739 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 KBTBD8Q8NFY9 601 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 CLIP3Q96DZ5 547 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 KCNS3Q9BQ31 491 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 SLC6A17Q9H1V8 727 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 SERHL2Q9H4I8 314 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 THSD1Q9NS62 852 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 SIRT3Q9NTG7 399 aaPredicted RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 ZFR2Q9UPR6 939 aaKnown RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 PCDHGA3Q9Y5H0 932 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 GLOD5A6NK44 160 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 C4orf51C9J302 202 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 AP3D1O14617 1153 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 UQCRC2P22695 453 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 RPL3P39023 403 aaKnown RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 UGT2B15P54855 530 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 RPA4Q13156 261 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 RUNX3Q13761 415 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 DOC2BQ14184 412 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 IRF4Q15306 451 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 CST6Q15828 149 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 ZNF605Q86T29 641 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 GPR32P1Q8NGA4 272 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 APOBEC4Q8WW27 367 aaKnown RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 GEMIN6Q8WXD5 167 aaKnown RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 TMEM19Q96HH6 336 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 TEFMQ96QE5 360 aaKnown RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 OR5M11Q96RB7 305 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 SDHCQ99643 169 aaPredicted RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 AIF1LQ9BQI0 150 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
TRIM25-202ENST00000537230 NLNQ9BYT8 704 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 NDEL1Q9GZM8 345 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 SYNPO2LQ9H987 977 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 ICKQ9UPZ9 632 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 STON1Q9Y6Q2 735 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 A3GALT2U3KPV4 340 aa12.2□□□□□ -0.46
TRIM25-202ENST00000537230 PRAMEF27A3QJZ7 478 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 KIAA0513O60268 411 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 GASTP01350 101 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 SLC35G4P0C7Q5 338 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 SPANXN2Q5MJ10 180 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 C9orf50Q5SZB4 431 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 NXNL2Q5VZ03 156 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 COMTD1Q86VU5 262 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 GATAD2AQ86YP4 633 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 PDXPQ96GD0 296 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 C12orf66Q96MD2 445 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 C17orf62Q9BQA9 187 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 KXD1Q9BQD3 176 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 KLHL31Q9H511 634 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 IGFLR1Q9H665 355 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 WASH6PQ9NQA3 447 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 PLCXD1Q9NUJ7 323 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 IMP3Q9NV31 184 aaKnown RBP12.19□□□□□ -0.46
TRIM25-202ENST00000537230 FKBP14Q9NWM8 211 aa12.19□□□□□ -0.46
TRIM25-202ENST00000537230 TRBV4-1A0A0J9YWV2 114 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms